RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ANKRD61A6NGH8 418 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 KLF11O14901 512 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 TSPAN1O60635 241 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 WDHD1O75717 1129 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 TSPAN9O75954 239 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 CLDN1O95832 211 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 WDPCPO95876 746 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 OR2T7P0C7T2 308 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 PTGER3P43115 390 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 MATR3P43243 847 aaKnown RBP eCLIP2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 CCR10P46092 362 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 NAP1L1P55209 391 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 SIM2Q14190 667 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 SQLEQ14534 574 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 PCLAFQ15004 111 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 MEA1Q16626 185 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 SGSM1Q2NKQ1 1148 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 ITPRIPL2Q3MIP1 535 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 IL27RAQ6UWB1 636 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 LACC1Q8IV20 430 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 TAGAPQ8N103 731 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 DCLK2Q8N568 766 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 NPEPL1Q8NDH3 523 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 MCUQ8NE86 351 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 OR11H4Q8NGC9 324 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 PTPMT1Q8WUK0 201 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 LPGAT1Q92604 370 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 DYRK2Q92630 601 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 CALML4Q96GE6 196 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 FUCA2Q9BTY2 467 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 CLEC7AQ9BXN2 247 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 ATP13A3Q9H7F0 1226 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 EPHA6Q9UF33 1036 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 LRWD1Q9UFC0 647 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 WDR37Q9Y2I8 494 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 WBP11Q9Y2W2 641 aaKnown RBP2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 ZNF541Q9H0D2 1346 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 RSF1Q96T23 1441 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 PCDH11YQ9BZA8 1340 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 GPR75-ASB3A0A0A6YYF3 556 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 FEZF1A0PJY2 475 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 MEX3AA1L020 520 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 MSGN1A6NI15 193 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 A8MV72 311 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 EPM2AB3EWF7 344 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 ZNF195O14628 629 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 MEIS2O14770 477 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 RNASEH1O60930 286 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 ENTPD3O75355 529 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 KHDRBS3O75525 346 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 DFFBO76075 338 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 IGHV4-31P0DP07 118 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 HSPA8P11142 646 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 ALOX12P18054 663 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 SAT1P21673 171 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 PTPN3P26045 913 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 SLC9A3P48764 834 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 STAT2P52630 851 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 CDH13P55290 713 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 GRAPQ13588 217 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 E2F5Q15329 346 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 RILPL1Q5EBL4 403 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 XKR3Q5GH77 459 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 SLC25A53Q5H9E4 307 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 ELFN2Q5R3F8 820 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 RNASEH2BQ5TBB1 312 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 PTAR1Q7Z6K3 402 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 RTN4RL2Q86UN3 420 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 KIRREL3Q8IZU9 778 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 EID3Q8N140 333 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 GUF1Q8N442 669 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 APPL2Q8NEU8 664 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 PRSS33Q8NF86 280 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 OR5AP2Q8NGF4 316 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 PHLDA1Q8WV24 401 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 CCDC107Q8WV48 283 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 NSUN4Q96CB9 384 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 MS4A10Q96PG2 267 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 URM1Q9BTM9 101 aaKnown RBP2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 SERINC1Q9NRX5 453 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 FGF21Q9NSA1 209 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 TBC1D22BQ9NU19 505 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 P4HTMQ9NXG6 502 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 PCDHGB4Q9UN71 923 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 ANGPTL3Q9Y5C1 460 aa2.8□□□□□ -1.96
SMCHD1-206ENST00000581631 ANKRD18BA2A2Z9 1011 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 KLLNB2CW77 178 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 PORP16435 677 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 JAK1P23458 1154 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 MNDAP41218 407 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 RPL21P46778 160 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 ZNF415Q09FC8 603 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 LMOD3Q0VAK6 560 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 COX10Q12887 443 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 EPS8Q12929 822 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 PEX6Q13608 980 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 CUL4AQ13619 759 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 C2CD6Q53TS8 623 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 SPDYCQ5MJ68 293 aa2.79□□□□□ -1.96
SMCHD1-206ENST00000581631 C20orf194Q5TEA3 1177 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms