RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 GNG11P61952 73 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 NFKB2Q00653 900 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 ACY1Q03154 408 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 C19orf57Q0VDD7 668 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 CTBP1Q13363 440 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 DHX34Q14147 1143 aaKnown RBP9.38□□□□□ -0.91
TOP3A-211ENST00000581536 ERV3-1Q14264 604 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.38□□□□□ -0.91
TOP3A-211ENST00000581536 ANKRD20A4Q4UJ75 823 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 FAM69BQ5VUD6 431 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 NEPROQ6NW34 567 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 CDHR3Q6ZTQ4 885 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 TMEM135Q86UB9 458 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 KMT5CQ86Y97 462 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 CREG2Q8IUH2 290 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 ESX1Q8N693 406 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 OTUD6BQ8N6M0 293 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 MCUQ8NE86 351 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 OR1L3Q8NH93 324 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 OR5K2Q8NHB8 316 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 CT55Q8WUE5 264 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 ASZ1Q8WWH4 475 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 STAMBPL1Q96FJ0 436 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 SLC45A3Q96JT2 553 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 SERPINB12Q96P63 405 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 IL17FQ96PD4 163 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 SLC30A3Q99726 388 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 MENTQ9BUN1 341 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 LHX9Q9NQ69 397 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 CUEDC1Q9NWM3 386 aaPredicted RBP9.38□□□□□ -0.91
TOP3A-211ENST00000581536 SOHLH2Q9NX45 425 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 POLG2Q9UHN1 485 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 BTRCQ9Y297 605 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 COL6A6A6NMZ7 2263 aa9.38□□□□□ -0.91
TOP3A-211ENST00000581536 GCN1Q92616 2671 aaKnown RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 ZCWPW2A0A1B0GU75 182 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 SERTM1A2A2V5 107 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 CDC14CA4D256 554 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 ZNF891A8MT65 544 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 C2orf74A8MZ97 194 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 ISM1B1AKI9 464 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 TMEM150CB9EJG8 249 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 AP3B1O00203 1094 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 SCRG1O75711 98 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 IVDP26440 423 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 PSMA6P60900 246 aaKnown RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 RPS18P62269 152 aaKnown RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 YBX1P67809 324 aaKnown RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 TUBB4BP68371 445 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 SARNPP82979 210 aaKnown RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 GPS2Q13227 327 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 TUBB2AQ13885 445 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 MAP7Q14244 749 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 PPP1R7Q15435 360 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 KYNUQ16719 465 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 DEFB109BQ30KR1 87 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 HP1BP3Q5SSJ5 553 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 PLEKHS1Q5SXH7 462 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 TMTC4Q5T4D3 741 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 LCE2CQ5TA81 110 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 RNASEH2BQ5TBB1 312 aaKnown RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 ZNF549Q6P9A3 640 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 SPESP1Q6UW49 350 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 SDCCAG8Q86SQ7 713 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 TAX1BP1Q86VP1 789 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 CILP2Q8IUL8 1156 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 IGDCC3Q8IVU1 814 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 DENND6AQ8IWF6 608 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 KLHL7Q8IXQ5 586 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 C17orf53Q8N3J3 647 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 LINC01555Q8NAE3 123 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 STARD8Q92502 1023 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 LPGAT1Q92604 370 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 ZNF669Q96BR6 464 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 MED8Q96G25 268 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 NAP1L3Q99457 506 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 TUBB2BQ9BVA1 445 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 PITPNM3Q9BZ71 974 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 TWSG1Q9GZX9 223 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 SPRTNQ9H040 489 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 FBXO6Q9NRD1 293 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-211ENST00000581536 SCN2AQ99250 2005 aa9.37□□□□□ -0.91
TOP3A-211ENST00000581536 SCN3AQ9NY46 2000 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 FASNP49327 2511 aaKnown RBP9.36□□□□□ -0.91
TOP3A-211ENST00000581536 FAM237BA0A1B0GVD1 139 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 MAGEB16A2A368 324 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 PYCARD-AS1I3L0S3 204 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 CES2O00748 559 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 WIPF1O43516 503 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 HAUS5O94927 633 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 ITGB2P05107 769 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 APOA4P06727 396 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 MLNP12872 115 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 CHRM3P20309 590 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 RPS3P23396 243 aaKnown RBP eCLIP9.36□□□□□ -0.91
TOP3A-211ENST00000581536 SHMT2P34897 504 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 GRIA3P42263 894 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 MAGEA3P43357 314 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 GABRA4P48169 554 aa9.36□□□□□ -0.91
TOP3A-211ENST00000581536 FNTAP49354 379 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms