RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 RNF224P0DH78 156 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 COL8A1P27658 744 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 GRM7Q14831 915 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 KCTD11Q693B1 232 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 ZNF787Q6DD87 383 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 KLHDC8BQ8IXV7 354 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 RAB42Q8N4Z0 105 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 UBL4BQ8N7F7 174 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 DNAAF3Q8N9W5 541 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 FAM71DQ8N9W8 422 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 PPP4R1Q8TF05 950 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 FAM118BQ9BPY3 351 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 EPS8L2Q9H6S3 715 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 SLC39A10Q9ULF5 831 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 MRFAP1Q9Y605 127 aa17.21■□□□□ 0.35
MKS1-209ENST00000580127 DIDO1Q9BTC0 2240 aaKnown RBP17.2■□□□□ 0.34
MKS1-209ENST00000580127 BHMG1C9JSJ3 638 aaPredicted RBP17.2■□□□□ 0.34
MKS1-209ENST00000580127 S1PR4O95977 384 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 APOA4P06727 396 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 UMODP07911 640 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 CDC16Q13042 620 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 TLR1Q15399 786 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 SF1Q15637 639 aaKnown RBP17.2■□□□□ 0.34
MKS1-209ENST00000580127 CRB2Q5IJ48 1285 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 FCRL6Q6DN72 434 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 NLRP9Q7RTR0 991 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 CUZD1Q86UP6 607 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 TTC29Q8NA56 475 aaPredicted RBP17.2■□□□□ 0.34
MKS1-209ENST00000580127 ZUFSPQ96AP4 578 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 TRIM5Q9C035 493 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 SEMA3GQ9NS98 782 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 ANAPC5Q9UJX4 755 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 FBXL4Q9UKA2 621 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 EPN1Q9Y6I3 576 aaPredicted RBP17.2■□□□□ 0.34
MKS1-209ENST00000580127 POLEQ07864 2286 aa17.2■□□□□ 0.34
MKS1-209ENST00000580127 FER1L5A0AVI2 2057 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 HEATR9A2RTY3 570 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 DSCR3O14972 297 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 HCRTR1O43613 425 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 ONECUT2O95948 504 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 PRSS56P0CW18 603 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 CD9P21926 228 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 PSMA3P25788 255 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 TSFMP43897 325 aaKnown RBP17.19■□□□□ 0.34
MKS1-209ENST00000580127 HSPA14Q0VDF9 509 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 CDH17Q12864 832 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 RBBP7Q16576 425 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 B3GNTL1Q67FW5 361 aaPredicted RBP17.19■□□□□ 0.34
MKS1-209ENST00000580127 KCNMB4Q86W47 210 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 TC2NQ8N9U0 490 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 FLVCR1-AS1Q8TAF5 88 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 LMF1Q96S06 567 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 RANBP9Q96S59 729 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 RAB11FIP5Q9BXF6 653 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 LHPPQ9H008 270 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 SLC26A1Q9H2B4 701 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 IMPACTQ9P2X3 320 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 AMFRQ9UKV5 643 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 PLAGL1Q9UM63 463 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 PRSS21Q9Y6M0 314 aa17.19■□□□□ 0.34
MKS1-209ENST00000580127 CCDC162PA2VCL2 907 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 TARM1B6A8C7 271 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 SRPX2O60687 465 aaPredicted RBP17.18■□□□□ 0.34
MKS1-209ENST00000580127 TPBGLP0DKB5 382 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 EDN3P14138 238 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 MAGP20916 626 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 STIP1P31948 543 aaKnown RBP17.18■□□□□ 0.34
MKS1-209ENST00000580127 CARSP49589 748 aaKnown RBP17.18■□□□□ 0.34
MKS1-209ENST00000580127 OCA2Q04671 838 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 NAA30Q147X3 362 aaPredicted RBP17.18■□□□□ 0.34
MKS1-209ENST00000580127 ZNF169Q14929 603 aaPredicted RBP17.18■□□□□ 0.34
MKS1-209ENST00000580127 TMED2Q15363 201 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 TUBB8Q3ZCM7 444 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 FASTKD1Q53R41 847 aaKnown RBP17.18■□□□□ 0.34
MKS1-209ENST00000580127 AARS2Q5JTZ9 985 aaKnown RBP17.18■□□□□ 0.34
MKS1-209ENST00000580127 FIGLAQ6QHK4 219 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 AFTPHQ6ULP2 937 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 UNC5DQ6UXZ4 953 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 SLC22A15Q8IZD6 547 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 RNF214Q8ND24 703 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 OR6P1Q8NGX9 317 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 OR4L1Q8NH43 312 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 CFAP61Q8NHU2 1237 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 HDAC10Q969S8 669 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 CARD6Q9BX69 1037 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 SLC6A20Q9NP91 592 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 CUTCQ9NTM9 273 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 TFR2Q9UP52 801 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 DOCK10Q96BY6 2186 aa17.18■□□□□ 0.34
MKS1-209ENST00000580127 A0A1B0GUH1 482 aa17.17■□□□□ 0.34
MKS1-209ENST00000580127 BTNL10A8MVZ5 291 aa17.17■□□□□ 0.34
MKS1-209ENST00000580127 E7EVH7 732 aa17.17■□□□□ 0.34
MKS1-209ENST00000580127 KPNA5O15131 536 aa17.17■□□□□ 0.34
MKS1-209ENST00000580127 LRRTM2O43300 516 aa17.17■□□□□ 0.34
MKS1-209ENST00000580127 CNOT3O75175 753 aaKnown RBP17.17■□□□□ 0.34
MKS1-209ENST00000580127 METTL18O95568 372 aa17.17■□□□□ 0.34
MKS1-209ENST00000580127 ADRA1DP25100 572 aa17.17■□□□□ 0.34
MKS1-209ENST00000580127 PKLRP30613 574 aa17.17■□□□□ 0.34
MKS1-209ENST00000580127 CSE1LP55060 971 aaKnown RBP17.17■□□□□ 0.34
MKS1-209ENST00000580127 NKG7Q16617 165 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms