RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	UNC5D	Q6UXZ4	953 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	TAX1BP1	Q86VP1	789 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	LRRC6	Q86X45	466 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	CILP2	Q8IUL8	1156 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	MMGT1	Q8N4V1	131 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	OTUD6B	Q8N6M0	293 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	DENND1A	Q8TEH3	1009 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	APOBEC4	Q8WW27	367 aa	Known RBP	13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	MR1	Q95460	341 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	ZNF669	Q96BR6	464 aa	Predicted RBP	13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	ABHD17A	Q96GS6	310 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	TCTN2	Q96GX1	697 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	LRFN5	Q96NI6	719 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	PANX3	Q96QZ0	392 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	TCF12	Q99081	682 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	TSSK1B	Q9BXA7	367 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	SERTAD3	Q9UJW9	196 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507	KCND3	Q9UK17	655 aa		13.66	□□□□□ -0.22
EDC4-210	ENST00000575507		A0A0J9YY10	115 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	MAGEB16	A2A368	324 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	FAM187A	A6NFU0	413 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507		F8W8V4	182 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	RASGRF2	O14827	1237 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	RECK	O95980	971 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	OGN	P20774	298 aa	Known RBP	13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	MAG	P20916	626 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	RAB28	P51157	221 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	ADAR	P55265	1226 aa	Known RBP	13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	MSS51	Q4VC12	460 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	ACSBG2	Q5FVE4	666 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	IZUMO3	Q5VZ72	239 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	FCRL6	Q6DN72	434 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	CNST	Q6PJW8	725 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	OTOA	Q7RTW8	1153 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	PTRH1	Q86Y79	214 aa	Known RBP	13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	DCUN1D3	Q8IWE4	304 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	OR2L8	Q8NGY9	312 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	CLIP3	Q96DZ5	547 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	GPR87	Q9BY21	358 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	ADNP	Q9H2P0	1102 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	PLAC1	Q9HBJ0	212 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	SYTL2	Q9HCH5	934 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	XAB2	Q9HCS7	855 aa	Known RBP	13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.65	□□□□□ -0.22
EDC4-210	ENST00000575507	CFAP46	Q8IYW2	2715 aa		13.65	□□□□□ -0.22
EDC4-210	ENST00000575507		A0A1W2PPV9	198 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507		E7EQ34	232 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	KPNA5	O15131	536 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	SUV39H1	O43463	412 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	HAUS5	O94927	633 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	MATN4	O95460	622 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	ESR1	P03372	595 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	KLK3	P07288	261 aa	Predicted RBP	13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	CBSL	P0DN79	551 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	SFTPC	P11686	197 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	PKM	P14618	531 aa	Known RBP	13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	CHRM3	P20309	590 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	NR1D1	P20393	614 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	CYP2A7	P20853	494 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	PSMB5	P28074	263 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	CBS	P35520	551 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	GRIA3	P42263	894 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	CLCN7	P51798	805 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	ITGA1	P56199	1179 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	FOXL2	P58012	376 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	PTK6	Q13882	451 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	FASTK	Q14296	549 aa	Known RBP	13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	TMED2	Q15363	201 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	GLE1	Q53GS7	698 aa	Known RBP	13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	COLEC12	Q5KU26	742 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	FAM198B	Q6UWH4	519 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	IGDCC3	Q8IVU1	814 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	PPIL6	Q8IXY8	311 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	SYTL1	Q8IYJ3	562 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	GIMAP7	Q8NHV1	300 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	PWWP2A	Q96N64	755 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	TRIM55	Q9BYV6	548 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	CHRNA10	Q9GZZ6	450 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	FANCE	Q9HB96	536 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	SAMD15	Q9P1V8	674 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	TUBD1	Q9UJT1	453 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	MAD1L1	Q9Y6D9	718 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507	FAM169A	Q9Y6X4	670 aa		13.64	□□□□□ -0.23
EDC4-210	ENST00000575507		J3QKU1	62 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	DNALI1	O14645	258 aa	Predicted RBP	13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	TTI1	O43156	1089 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	SLC28A2	O43868	658 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	NRP2	O60462	931 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	DNAJB5	O75953	348 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	OR2B3	O76000	313 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	ATXN8OS	P0DMR3	200 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	SLC1A2	P43004	574 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	GCGR	P47871	477 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	RPS15	P62841	145 aa	Known RBP	13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	UGT8	Q16880	541 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	KLHL38	Q2WGJ6	581 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms