RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SDR42E2A6NKP2 422 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 C9J4A7 227 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 E5RI56 91 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 RASGRF2O14827 1237 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 FANCGO15287 622 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 HCRTR1O43613 425 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 DNAJB5O75953 348 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 RECKO95980 971 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 ESR1P03372 595 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 RAB40ALP0C0E4 278 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 NR1D1P20393 614 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 OGNP20774 298 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 MAGP20916 626 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 PMS2P54278 862 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 CHAF1BQ13112 559 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 THOC5Q13769 683 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 GRB7Q14451 532 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 PPP1R7Q15435 360 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 SF1Q15637 639 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 TYSND1Q2T9J0 566 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 COLEC12Q5KU26 742 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 PAPD7Q5XG87 772 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 ZNF470Q6ECI4 717 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 NEPROQ6NW34 567 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 ZNF517Q6ZMY9 492 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 CREG2Q8IUH2 290 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 RAB42Q8N4Z0 105 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 ZNF655Q8N720 491 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 OR2L8Q8NGY9 312 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 THAP4Q8WY91 577 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 LPGAT1Q92604 370 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 RAD51AP1Q96B01 352 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 SLC22A18Q96BI1 424 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 BIRC8Q96P09 236 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 SERPINB12Q96P63 405 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 TCF12Q99081 682 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 RAB11FIP5Q9BXF6 653 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 NLNQ9BYT8 704 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 XAB2Q9HCS7 855 aaKnown RBP12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 TXLNGQ9NUQ3 528 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 TLK1Q9UKI8 766 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 TCFL5Q9UL49 500 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 MRFAP1Q9Y605 127 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 MAD1L1Q9Y6D9 718 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 AP1M2Q9Y6Q5 423 aa12.24□□□□□ -0.45
NPLOC4-213ENST00000573519 FAM237BA0A1B0GVD1 139 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 MAGEB16A2A368 324 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 KRT87PA6NCN2 255 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 H3BMM5 538 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 ZSCAN9O15535 394 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 WISP1O95388 367 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 C1orf105O95561 183 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 S1PR4O95977 384 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 CTSBP07858 339 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 F7P08709 466 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 CBSLP0DN79 551 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 MLNP12872 115 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 CBSP35520 551 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 KCNC4Q03721 635 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 TLE1Q04724 770 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 SLC9A5Q14940 896 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 CCSMST1Q4G0I0 132 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 ANKRD20A4Q4UJ75 823 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 MLIPQ5VWP3 458 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 CPZQ66K79 652 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 FAM198BQ6UWH4 519 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 CILP2Q8IUL8 1156 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 KLHL7Q8IXQ5 586 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 ZBTB2Q8N680 514 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 MCUQ8NE86 351 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 DPH2Q9BQC3 489 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 MENTQ9BUN1 341 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 TRIM55Q9BYV6 548 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 ACSS2Q9NR19 701 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 INTS7Q9NVH2 962 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 DHCR7Q9UBM7 475 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 ASIC3Q9UHC3 531 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 GPN3Q9UHW5 284 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 PLCL2Q9UPR0 1127 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 VPS9D1Q9Y2B5 631 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 PADI2Q9Y2J8 665 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 SAR1BQ9Y6B6 198 aa12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 FASNP49327 2511 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-213ENST00000573519 K7EM74 188 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 PKMP14618 531 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 PSMB5P28074 263 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 CCNFP41002 786 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 GRIA3P42263 894 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 PTGIRP43119 386 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 GABRA4P48169 554 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 CCL11P51671 97 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 CTBP1Q13363 440 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 NCF4Q15080 339 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 RNASEH2BQ5TBB1 312 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 ARMC3Q5W041 872 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 TLDC1Q6P9B6 456 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 ASB18Q6ZVZ8 466 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 CENPUQ71F23 418 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 APLFQ8IW19 511 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 PPIL6Q8IXY8 311 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms