RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 BRD3Q15059 726 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 POU4F3Q15319 338 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 TBR1Q16650 682 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 LINC00303Q3SY05 128 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 LCE1DQ5T752 114 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 AFTPHQ6ULP2 937 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 C6orf15Q6UXA7 325 aaPredicted RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 PACS1Q6VY07 963 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 ZNF605Q86T29 641 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 PPP1R3BQ86XI6 285 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 KMT5CQ86Y97 462 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 UNC5BQ8IZJ1 945 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 ZNF843Q8N446 348 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 ESX1Q8N693 406 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 PRELID2Q8N945 189 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 EXD3Q8N9H8 876 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 PPHLN1Q8NEY8 458 aaKnown RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 OR52E1Q8NGJ3 308 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 STK35Q8TDR2 534 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 LCN9Q8WX39 176 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 ELMO1Q92556 727 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 KIAA1143Q96AT1 154 aaPredicted RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 MED8Q96G25 268 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 SLC45A3Q96JT2 553 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 SLC41A2Q96JW4 573 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 PBKQ96KB5 322 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 FCRL4Q96PJ5 515 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 ULBP3Q9BZM4 244 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 SRMSQ9H3Y6 488 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 TFB2MQ9H5Q4 396 aaKnown RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 MVB12BQ9H7P6 319 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 GPN2Q9H9Y4 310 aaPredicted RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 GRPEL1Q9HAV7 217 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 EIF2B3Q9NR50 452 aaKnown RBP7.22□□□□□ -1.25
NUP88-205ENST00000572809 BFARQ9NZS9 450 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 RARRES3Q9UL19 164 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 TCAF1Q9Y4C2 921 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 AHCTF1Q8WYP5 2266 aa7.22□□□□□ -1.25
NUP88-205ENST00000572809 SLC5A10A0PJK1 596 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 GOLGA6L3A6NEY3 463 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 TLCD2A6NGC4 264 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 ZNF891A8MT65 544 aaPredicted RBP7.21□□□□□ -1.26
NUP88-205ENST00000572809 MATN2O00339 956 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 BTN3A3O00478 584 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 CD3EAPO15446 510 aaKnown RBP7.21□□□□□ -1.26
NUP88-205ENST00000572809 NKX2-8O15522 239 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 ZSCAN12O43309 604 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 OR1I1O60431 355 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 ZBTB11O95625 1053 aaPredicted RBP7.21□□□□□ -1.26
NUP88-205ENST00000572809 MT-ND3P03897 115 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 EBLN1P0CF75 366 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 CDH3P22223 829 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 ACADLP28330 430 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 PRDX3P30048 256 aaKnown RBP7.21□□□□□ -1.26
NUP88-205ENST00000572809 STAT5AP42229 794 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 PREPP48147 710 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 KPNA2P52292 529 aaKnown RBP7.21□□□□□ -1.26
NUP88-205ENST00000572809 TERF1P54274 439 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 SARNPP82979 210 aaKnown RBP7.21□□□□□ -1.26
NUP88-205ENST00000572809 CDK16Q00536 496 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 TUBB3Q13509 450 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 BOP1Q14137 746 aaKnown RBP7.21□□□□□ -1.26
NUP88-205ENST00000572809 KCNAB1Q14722 419 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 TRIP13Q15645 432 aaPredicted RBP7.21□□□□□ -1.26
NUP88-205ENST00000572809 HP1BP3Q5SSJ5 553 aaPredicted RBP7.21□□□□□ -1.26
NUP88-205ENST00000572809 TMTC4Q5T4D3 741 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 LRRC8BQ6P9F7 803 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 FBXO38Q6PIJ6 1188 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 NAPRTQ6XQN6 538 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 ZNF534Q76KX8 674 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 AMIGO1Q86WK6 493 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 REXO1L1PQ8IX06 675 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 DMRTC2Q8IXT2 367 aaPredicted RBP7.21□□□□□ -1.26
NUP88-205ENST00000572809 TBC1D21Q8IYX1 336 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 CARFQ8N187 725 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 RASGEF1CQ8N431 466 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 D2HGDHQ8N465 521 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 MAGOHBQ96A72 148 aaKnown RBP7.21□□□□□ -1.26
NUP88-205ENST00000572809 RNF31Q96EP0 1072 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 STAMBPL1Q96FJ0 436 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 MS4A14Q96JA4 679 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 CATSPER2Q96P56 530 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 CARD6Q9BX69 1037 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 TSSK1BQ9BXA7 367 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 SEMA4CQ9C0C4 833 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 IL22Q9GZX6 179 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 C1GALT1Q9NS00 363 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 FGF21Q9NSA1 209 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 KCND1Q9NSA2 647 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 CATSPERZQ9NTU4 200 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 POLG2Q9UHN1 485 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 LNPEPQ9UIQ6 1025 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 PADI1Q9ULC6 663 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 ASF1AQ9Y294 204 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 RPS6KL1Q9Y6S9 549 aa7.21□□□□□ -1.26
NUP88-205ENST00000572809 TCRBV7S3A2A0A539 114 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 MAGEB16A2A368 324 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 GSAPA4D1B5 854 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 SLC9B1P1A6NJY1 282 aa7.2□□□□□ -1.26
NUP88-205ENST00000572809 C2orf74A8MZ97 194 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms