RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 APCP25054 2843 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 TACC2O95359 2948 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 ZNF840PA6NDX5 716 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 LAD1O00515 517 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 PIRO00625 290 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 SLC9A3R1O14745 358 aaPredicted RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 SPTLC2O15270 562 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 CLDN3O15551 220 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 SYNCRIPO60506 623 aaKnown RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 REC8O95072 547 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 TNFSF15O95150 251 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 IGLV2-14P01704 120 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 TUBB4AP04350 444 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 CISD3P0C7P0 127 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 CCDC172P0C7W6 258 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 CKMT2P17540 419 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 RPS6KB1P23443 525 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 LMO2P25791 158 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 GSTM2P28161 218 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 TNFRSF8P28908 595 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 RBMS1P29558 406 aaKnown RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 MAN1A1P33908 653 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 GGT5P36269 586 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 PTH2RP49190 550 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 ACOT2P49753 483 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 MLLT10P55197 1068 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 TPM4P67936 248 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 TSPY1Q01534 308 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 RHAGQ02094 409 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 ZBTB16Q05516 673 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 PTP4A2Q12974 167 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 NAA25Q14CX7 972 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 POM121L1PQ3SYA9 428 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 VWA5B1Q5TIE3 1220 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 SPATA1Q5VX52 437 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 AADACL2Q6P093 401 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 MOXD1Q6UVY6 613 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 ZNF813Q6ZN06 617 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 SPATA2LQ8IUW3 424 aaPredicted RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 ADGRF2Q8IZF7 708 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 CNPY4Q8N129 248 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 DAW1Q8N136 415 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 FAM47BQ8NA70 645 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 NFKBIDQ8NI38 313 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 GANCQ8TET4 914 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 SNRNP27Q8WVK2 155 aaKnown RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 ANKRD7Q92527 254 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 CCNL2Q96S94 520 aaPredicted RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 AGAP2Q99490 1192 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 FAM107BQ9H098 131 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 IKZF4Q9H2S9 585 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 RWDD1Q9H446 243 aaPredicted RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 POLR1BQ9H9Y6 1135 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 SEMA4BQ9NPR2 832 aaPredicted RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 OLA1Q9NTK5 396 aaKnown RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 ARL15Q9NXU5 204 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 DDX43Q9NXZ2 648 aaKnown RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 DPP3Q9NY33 737 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 UXTQ9UBK9 157 aaPredicted RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 UPB1Q9UBR1 384 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 LRWD1Q9UFC0 647 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 CLEC4EQ9ULY5 219 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 CA5BQ9Y2D0 317 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 HIVEP3Q5T1R4 2406 aa5.38□□□□□ -1.55
SF3B3-214ENST00000572365 DIDO1Q9BTC0 2240 aaKnown RBP5.38□□□□□ -1.55
SF3B3-214ENST00000572365 VPS37CA5D8V6 355 aaPredicted RBP5.37□□□□□ -1.55
SF3B3-214ENST00000572365 LRRC3CA6NJW4 275 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 VGLL3A8MV65 326 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 KPNA7A9QM74 516 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 TEX22C9J3V5 150 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 E9PMD0 336 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 KIF2AO00139 706 aaPredicted RBP5.37□□□□□ -1.55
SF3B3-214ENST00000572365 CLDN5O00501 218 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 TSPAN4O14817 238 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 MDM4O15151 490 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 COCHO43405 550 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 ATP8B1O43520 1251 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 RNF8O76064 485 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 SEMA4FO95754 770 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 PLAUP00749 431 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 HLA-DQA2P01906 255 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 CHRM4P08173 479 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 CLTAP09496 248 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 IFNAR1P17181 557 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 ELAVL4P26378 380 aaKnown RBP5.37□□□□□ -1.55
SF3B3-214ENST00000572365 OXTRP30559 389 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 EIF2DP41214 584 aaKnown RBP5.37□□□□□ -1.55
SF3B3-214ENST00000572365 PAFAH1B1P43034 410 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 NUMBP49757 651 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 SLC7A9P82251 487 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 MTA1Q13330 715 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 IL13RA2Q14627 380 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 DRAP1Q14919 205 aaPredicted RBP5.37□□□□□ -1.55
SF3B3-214ENST00000572365 ZRSR1Q15695 479 aaKnown RBP5.37□□□□□ -1.55
SF3B3-214ENST00000572365 AP5B1Q2VPB7 878 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 NAPEPLDQ6IQ20 393 aa5.37□□□□□ -1.55
SF3B3-214ENST00000572365 R3HCC1LQ7Z5L2 792 aaKnown RBP5.37□□□□□ -1.55
SF3B3-214ENST00000572365 KLBQ86Z14 1044 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms