RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 PARVBQ9HBI1 364 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 SERHLQ9NQF3 203 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 PCDHGB1Q9Y5G3 927 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 GMPPBQ9Y5P6 360 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.05■□□□□ 0.32
SCARF1-205ENST00000571272 MTMR11A4FU01 709 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 HTR3EA5X5Y0 456 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 FAM220BPB1ANY3 271 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 S100A3P33764 101 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 HOXD12P35452 270 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 GZMMP51124 257 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 HUNKP57058 714 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 ZNF177Q13360 481 aaPredicted RBP17.05■□□□□ 0.32
SCARF1-205ENST00000571272 ARHGEF7Q14155 803 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 CATSPEREQ5SY80 951 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 SHQ1Q6PI26 577 aaKnown RBP17.05■□□□□ 0.32
SCARF1-205ENST00000571272 FKBP9P1Q75LS8 142 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 ZNF551Q7Z340 670 aaPredicted RBP17.05■□□□□ 0.32
SCARF1-205ENST00000571272 CALHM3Q86XJ0 350 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 OR6Q1Q8NGQ2 317 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 OR6K2Q8NGY2 324 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 FBLIM1Q8WUP2 373 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 ZNF566Q969W8 418 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 YIPF6Q96EC8 236 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 ZNF641Q96N77 438 aaPredicted RBP17.05■□□□□ 0.32
SCARF1-205ENST00000571272 FAM193BQ96PV7 902 aaPredicted RBP17.05■□□□□ 0.32
SCARF1-205ENST00000571272 ZNF300Q96RE9 604 aaPredicted RBP17.05■□□□□ 0.32
SCARF1-205ENST00000571272 ASPSCR1Q9BZE9 553 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 GPR62Q9BZJ7 368 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 DUSP21Q9H596 190 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 NECTIN3Q9NQS3 549 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 LATS2Q9NRM7 1088 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 GKN1Q9NS71 199 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 SCN3BQ9NY72 215 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 GOLGA8CPA6NN73 597 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 H7C0S8 307 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 M0QX08 132 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 PRAMEF1O95521 474 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 ITGAMP11215 1152 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 TACR1P25103 407 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 SERPINB10P48595 397 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 SLC11A2P49281 568 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 RGS4P49798 205 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 NEK2P51955 445 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 ARF5P84085 180 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 IL18R1Q13478 541 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 ATXN7L2Q5T6C5 722 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-205ENST00000571272 DOK6Q6PKX4 331 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 SETD9Q8NE22 299 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 DYNC2LI1Q8TCX1 351 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 REXO5Q96IC2 774 aaKnown RBP17.04■□□□□ 0.32
SCARF1-205ENST00000571272 KLHL25Q9H0H3 589 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 PRDM8Q9NQV8 689 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 OARD1Q9Y530 152 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 KLKB1P03952 638 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 ZNF7P17097 686 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-205ENST00000571272 ACVR2AP27037 513 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 ST13P50502 369 aaKnown RBP17.04■□□□□ 0.32
SCARF1-205ENST00000571272 RPS14P62263 151 aaKnown RBP17.04■□□□□ 0.32
SCARF1-205ENST00000571272 HIST2H2ACQ16777 129 aaPredicted RBP17.04■□□□□ 0.32
SCARF1-205ENST00000571272 ZC3H12BQ5HYM0 836 aaKnown RBP17.04■□□□□ 0.32
SCARF1-205ENST00000571272 TRIM46Q7Z4K8 759 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 SLC22A16Q86VW1 577 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 RASAL3Q86YV0 1011 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 ACPTQ9BZG2 426 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 ASB8Q9H765 288 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 GPRC5BQ9NZH0 403 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 RBMX2Q9Y388 322 aaKnown RBP17.04■□□□□ 0.32
SCARF1-205ENST00000571272 PIKFYVEQ9Y2I7 2098 aa17.04■□□□□ 0.32
SCARF1-205ENST00000571272 ERN1O75460 977 aaKnown RBP17.03■□□□□ 0.32
SCARF1-205ENST00000571272 SEC24AO95486 1093 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 VNN2O95498 520 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 LCKP06239 509 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 IRF1P10914 325 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 ATP5C1P36542 298 aaKnown RBP17.03■□□□□ 0.32
SCARF1-205ENST00000571272 TAF1CQ15572 869 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-205ENST00000571272 VTCN1Q7Z7D3 282 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 TMEM132CQ8N3T6 1108 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 PAF1Q8N7H5 531 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 PSMA8Q8TAA3 256 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 EGLN2Q96KS0 407 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 TNKS2Q9H2K2 1166 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 PDP1Q9P0J1 537 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-205ENST00000571272 PCDHB1Q9Y5F3 818 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 A8MX80 341 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 FAM20BO75063 409 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 CLDN11O75508 207 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 CD160O95971 181 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 ASGR1P07306 291 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 EPB42P16452 691 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 CARTPTQ16568 116 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 C5orf22Q49AR2 442 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 SYT6Q5T7P8 510 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-205ENST00000571272 OR2T5Q6IEZ7 315 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 PLEKHG7Q6ZR37 379 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 PLPP6Q8IY26 295 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 TTC29Q8NA56 475 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-205ENST00000571272 OR2T29Q8NH02 315 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 LGALS12Q96DT0 336 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 KCNH6Q9H252 994 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms