RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ZDHHC12Q96GR4 267 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 C5orf30Q96GV9 206 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 HPDLQ96IR7 371 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 APOLD1Q96LR9 279 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CPXM1Q96SM3 734 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 INTS14Q96SY0 518 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 GAD1Q99259 594 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 KRT12Q99456 494 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 RBM4BQ9BQ04 359 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 PAAF1Q9BRP4 392 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 TRIM51Q9BSJ1 452 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 EFHD1Q9BUP0 239 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 RBM4Q9BWF3 364 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 BBS2Q9BXC9 721 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 BHLHE41Q9C0J9 482 aaPredicted RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 MCOLN1Q9GZU1 580 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 DDX47Q9H0S4 455 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 RAB17Q9H0T7 212 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 OR51V1Q9H2C8 321 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 NKX2-4Q9H2Z4 354 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 TP63Q9H3D4 680 aaPredicted RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 ASB7Q9H672 318 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ZMAT4Q9H898 229 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 METTL7AQ9H8H3 244 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 EVA1AQ9H8M9 152 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ECT2Q9H8V3 914 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 KCNK12Q9HB15 430 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 CYP3A43Q9HB55 503 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 NT5MQ9NPB1 228 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 PPANQ9NQ55 473 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 FAM49BQ9NUQ9 324 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 FAM105AQ9NUU6 356 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 FBXO34Q9NWN3 711 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ZSCAN32Q9NX65 697 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ZDHHC7Q9NXF8 308 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 MRPL39Q9NYK5 338 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 CRNNQ9UBG3 495 aaPredicted RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 DNAJB11Q9UBS4 358 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 PEF1Q9UBV8 284 aaKnown RBP3.49□□□□□ -1.85
SMG6-208ENST00000570874 LPAR3Q9UBY5 353 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ANAPC7Q9UJX3 599 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ADAMTS6Q9UKP5 1117 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 STAP1Q9ULZ2 295 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 SOX13Q9UN79 622 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ST3GAL5Q9UNP4 418 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 NCKAP1Q9Y2A7 1128 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 PPIL1Q9Y3C6 166 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 HRH3Q9Y5N1 445 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 ALG6Q9Y672 507 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 RNF215Q9Y6U7 377 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 LRRK1Q38SD2 2015 aa3.49□□□□□ -1.85
SMG6-208ENST00000570874 MYO9BQ13459 2157 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 C2orf92A0A1B0GVN3 265 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 A0A1W2PQ45 241 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 LOC390937A0A1W2PQ73 354 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 A0A1W2PQY0 241 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 HTR3EA5X5Y0 456 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CFAP73A6NFT4 308 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CASTOR2A6NHX0 329 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SAC3D1A6NKF1 404 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SNTNA6NMZ2 147 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 METTL12A8MUP2 240 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CCDC188H7C350 402 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ZNF701M0R085 212 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 LGALS8O00214 317 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CLDN5O00501 218 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PIRO00625 290 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 STX16O14662 325 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 KMOO15229 486 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 GRAP2O75791 330 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CLPXO76031 633 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PDE9AO76083 593 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SORBS2O94875 1100 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 CCNB2O95067 398 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 AHSA1O95433 338 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 MATN4O95460 622 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 GLP2RO95838 553 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 GAS8O95995 478 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PRLP01236 227 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 MPOP05164 745 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CAPN1P07384 714 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ZNF888P0CJ79 500 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 NAGAP17050 411 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 M6PRP20645 277 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ADORA2BP29275 332 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 PDHA2P29803 388 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CDH5P33151 784 aaPredicted RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 SLC15A1P46059 708 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 NSFP46459 744 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 BRCC3P46736 316 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SLC7A2P52569 658 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 ACLYP53396 1101 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 P2RX3P56373 397 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 CLDN8P56748 225 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 TNNC1P63316 161 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 POU4F1Q01851 419 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 DHX9Q08211 1270 aaKnown RBP3.48□□□□□ -1.85
SMG6-208ENST00000570874 RASGEF1BQ0VAM2 473 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SCRN3Q0VDG4 424 aa3.48□□□□□ -1.85
SMG6-208ENST00000570874 SMARCB1Q12824 385 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms