RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 N4BP2L2Q92802 583 aaPredicted RBP11.92□□□□□ -0.5
SCAMP2-212ENST00000569904 PNPLA2Q96AD5 504 aa11.92□□□□□ -0.5
SCAMP2-212ENST00000569904 FER1L6-AS2Q96M78 137 aa11.92□□□□□ -0.5
SCAMP2-212ENST00000569904 ZNF285Q96NJ3 590 aa11.92□□□□□ -0.5
SCAMP2-212ENST00000569904 SPRTNQ9H040 489 aaPredicted RBP11.92□□□□□ -0.5
SCAMP2-212ENST00000569904 CATSPERZQ9NTU4 200 aa11.92□□□□□ -0.5
SCAMP2-212ENST00000569904 GPR83Q9NYM4 423 aa11.92□□□□□ -0.5
SCAMP2-212ENST00000569904 VPS4AQ9UN37 437 aa11.92□□□□□ -0.5
SCAMP2-212ENST00000569904 G3BP2Q9UN86 482 aaKnown RBP11.92□□□□□ -0.5
SCAMP2-212ENST00000569904 DRG1Q9Y295 367 aaKnown RBP11.92□□□□□ -0.5
SCAMP2-212ENST00000569904 UTP20O75691 2785 aaKnown RBP11.92□□□□□ -0.5
SCAMP2-212ENST00000569904 IQCF5A8MTL0 148 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 ISM1B1AKI9 464 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 RASGRF2O14827 1237 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 ZNF185O15231 689 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 ALBP02768 609 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 APOA4P06727 396 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 ETS1P14921 441 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 MAGP20916 626 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 RPS3P23396 243 aaKnown RBP eCLIP11.91□□□□□ -0.57e-8■■■■□ 22.2
SCAMP2-212ENST00000569904 VARSP26640 1264 aaKnown RBP11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 HSPA14Q0VDF9 509 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 NKAIN1Q4KMZ8 207 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 VWA5B1Q5TIE3 1220 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 ARMC3Q5W041 872 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 SLC6A19Q695T7 634 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 IGFL3Q6UXB1 125 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 PRUNE1Q86TP1 453 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 LRRC6Q86X45 466 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 CCDC89Q8N998 374 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 HMGCLL1Q8TB92 370 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 DENND1AQ8TEH3 1009 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 FKBP10Q96AY3 582 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 PANX3Q96QZ0 392 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 RAB11FIP5Q9BXF6 653 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 IL22Q9GZX6 179 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 SLC26A1Q9H2B4 701 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 MRM3Q9HC36 420 aaKnown RBP11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 CHRAC1Q9NRG0 131 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 SLC22A11Q9NSA0 550 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 EURLQ9NYK6 297 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 MARCH4Q9P2E8 410 aaPredicted RBP11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 IFT80Q9P2H3 777 aaPredicted RBP11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 DHCR7Q9UBM7 475 aaKnown RBP11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 PLAGL1Q9UM63 463 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 DOCK10Q96BY6 2186 aa11.91□□□□□ -0.5
SCAMP2-212ENST00000569904 FITM1A5D6W6 292 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 TARM1B6A8C7 271 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 KPNA5O15131 536 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 CD3EAPO15446 510 aaKnown RBP11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 KLHL41O60662 606 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 UMODP07911 640 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 ZSCAN5DPP0CG00 497 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 ITGAXP20702 1163 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 FOLR3P41439 243 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 UQCRFS1P47985 274 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 NPY2RP49146 381 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 ARSFP54793 590 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 ADARP55265 1226 aaKnown RBP11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 CDK16Q00536 496 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 SNX1Q13596 522 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 GBX1Q14549 363 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 MYBPC3Q14896 1274 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 DCAF10Q5QP82 559 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 C1orf189Q5VU69 101 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 YOD1Q5VVQ6 348 aaPredicted RBP11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 MLIPQ5VWP3 458 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 FCRL6Q6DN72 434 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 PPP1R32Q7Z5V6 425 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 ZNF655Q8N720 491 aaPredicted RBP11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 EFCAB3Q8N7B9 438 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 DLG3Q92796 817 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 ZUFSPQ96AP4 578 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 PTERQ96BW5 349 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 NDC1Q9BTX1 674 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 KIFC1Q9BW19 673 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 WDR54Q9H977 334 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 TXLNGQ9NUQ3 528 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 NDOR1Q9UHB4 597 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 GPN3Q9UHW5 284 aaPredicted RBP11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 GNPTGQ9UJJ9 305 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 ANAPC5Q9UJX4 755 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 GUCA1BQ9UMX6 200 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 PTRH2Q9Y3E5 179 aaKnown RBP11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 MRFAP1Q9Y605 127 aa11.9□□□□□ -0.5
SCAMP2-212ENST00000569904 A0A1B0GX78 115 aa11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 C1orf105O95561 183 aa11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 TPSB2P20231 275 aa11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 GNLYP22749 145 aa11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 ARNTP27540 789 aa11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 OTX2P32243 289 aa11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 CSE1LP55060 971 aaKnown RBP11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 TMED2Q15363 201 aa11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 RPS6KA1Q15418 735 aa11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 TPSAB1Q15661 275 aa11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 INPP5JQ15735 1006 aaPredicted RBP11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 TYSND1Q2T9J0 566 aa11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 ZC3H12BQ5HYM0 836 aaKnown RBP11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 CRB2Q5IJ48 1285 aa11.89□□□□□ -0.51
SCAMP2-212ENST00000569904 TCTE1Q5JU00 501 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms