RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 RAB28P51157 221 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 PNLIPRP1P54315 467 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 NAGLUP54802 743 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 HERVK_113P63132 956 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 GUCY1A3Q02108 690 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 TAP2Q03519 686 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 ASPHQ12797 758 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 NAE1Q13564 534 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 FASTKQ14296 549 aaKnown RBP12.12□□□□□ -0.47
EDC3-217ENST00000569606 CHI3L2Q15782 390 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 CSRP2Q16527 193 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 PDK4Q16654 411 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 PTCHD3Q3KNS1 767 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 UNC50Q53HI1 259 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 CES4AQ5XG92 561 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 ZCCHC8Q6NZY4 707 aaKnown RBP12.12□□□□□ -0.47
EDC3-217ENST00000569606 ZCCHC23Q6ZST2 131 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 TMEM26Q6ZUK4 368 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 RBM12BQ8IXT5 1001 aaKnown RBP12.12□□□□□ -0.47
EDC3-217ENST00000569606 KLHDC8AQ8IYD2 350 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 SYTL1Q8IYJ3 562 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 RAB42Q8N4Z0 105 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 ARL10Q8N8L6 244 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 AVL9Q8NBF6 648 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 PPFIBP2Q8ND30 876 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 HMGCLL1Q8TB92 370 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 DYDC1Q8WWB3 177 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 LCN9Q8WX39 176 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 SREK1Q8WXA9 508 aaKnown RBP12.12□□□□□ -0.47
EDC3-217ENST00000569606 JPH3Q8WXH2 748 aaPredicted RBP12.12□□□□□ -0.47
EDC3-217ENST00000569606 PYCR2Q96C36 320 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 MOCOSQ96EN8 888 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 RAB11FIP5Q9BXF6 653 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 ERVK-6Q9BXR3 956 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 CD244Q9BZW8 370 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 STN1Q9H668 368 aaKnown RBP12.12□□□□□ -0.47
EDC3-217ENST00000569606 XKR8Q9H6D3 395 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 ACSS2Q9NR19 701 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 SEMA4GQ9NTN9 838 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 LNPEPQ9UIQ6 1025 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 PCDHGB2Q9Y5G2 931 aa12.12□□□□□ -0.47
EDC3-217ENST00000569606 TNPO3Q9Y5L0 923 aaKnown RBP12.12□□□□□ -0.47
EDC3-217ENST00000569606 ARID1BQ8NFD5 2236 aaPredicted RBP12.11□□□□□ -0.47
EDC3-217ENST00000569606 ZNF839A8K0R7 811 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 K7EPI3 171 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 E2F3O00716 465 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 CDX4O14627 284 aaPredicted RBP12.11□□□□□ -0.47
EDC3-217ENST00000569606 KDM1AO60341 852 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 H2AFYO75367 372 aaKnown RBP12.11□□□□□ -0.47
EDC3-217ENST00000569606 STK16O75716 305 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 SERPINE1P05121 402 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 NEFHP12036 1026 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 TGM1P22735 817 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 SHMT2P34897 504 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 GDF5P43026 501 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 TBPL1P62380 186 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 ANKS6Q68DC2 871 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 METTL2BQ6P1Q9 378 aaKnown RBP12.11□□□□□ -0.47
EDC3-217ENST00000569606 DBX2Q6ZNG2 339 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 RPS27LQ71UM5 84 aaKnown RBP12.11□□□□□ -0.47
EDC3-217ENST00000569606 TRIM42Q8IWZ5 723 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 FAM181AQ8N9Y4 354 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 LINC01555Q8NAE3 123 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 OR2L8Q8NGY9 312 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 OR56A3Q8NH54 315 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 RAB3IL1Q8TBN0 382 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 ZNF483Q8TF39 744 aaPredicted RBP12.11□□□□□ -0.47
EDC3-217ENST00000569606 ZNF75CPQ92670 426 aaPredicted RBP12.11□□□□□ -0.47
EDC3-217ENST00000569606 SH3KBP1Q96B97 665 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 MAGEB18Q96M61 343 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 NSUN5Q96P11 429 aaKnown RBP12.11□□□□□ -0.47
EDC3-217ENST00000569606 SGPP1Q9BX95 441 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 PITPNM3Q9BZ71 974 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 TWSG1Q9GZX9 223 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 GSTO2Q9H4Y5 243 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 SLC32A1Q9H598 525 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 CCDC134Q9H6E4 229 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 MANSC1Q9H8J5 431 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 UCK1Q9HA47 277 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 PARD6AQ9NPB6 346 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 RXFP3Q9NSD7 469 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 INTS7Q9NVH2 962 aaKnown RBP12.11□□□□□ -0.47
EDC3-217ENST00000569606 PCTPQ9UKL6 214 aa12.11□□□□□ -0.47
EDC3-217ENST00000569606 CABIN1Q9Y6J0 2220 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 LY6G6EA0A0G2JKS1 128 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 A0A1W2PPV9 198 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 LILRA5A6NI73 299 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 PROB1E7EW31 1015 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 KLF11O14901 512 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 SIGLEC6O43699 453 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 ITM2AO43736 263 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 NPHS1O60500 1241 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 CCNT2O60583 730 aaKnown RBP12.1□□□□□ -0.47
EDC3-217ENST00000569606 SUPT7LO94864 414 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 WDR47O94967 919 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 GRK2P25098 689 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 ARRB2P32121 409 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 NAA20P61599 178 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 BST1Q10588 318 aa12.1□□□□□ -0.47
EDC3-217ENST00000569606 SUZ12Q15022 739 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms