RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CDKN2AIPNLQ96HQ2 116 aa15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 CALR3Q96L12 384 aaKnown RBP15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 ALS2CR12Q96Q35 445 aa15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 LMF1Q96S06 567 aa15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 TTC1Q99614 292 aa15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 SPSB2Q99619 263 aa15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 SLX1AQ9BQ83 275 aa15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 HEMGNQ9BXL5 484 aa15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 SLC22A11Q9NSA0 550 aa15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 SMARCAL1Q9NZC9 954 aa15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 HS3ST3B1Q9Y662 390 aa15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 LRBAP50851 2863 aa15.13■□□□□ 0.01
HERPUD1-215ENST00000568676 SLC5A10A0PJK1 596 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 CCDC78A2IDD5 438 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 SOCS6O14544 535 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 DSCR3O14972 297 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 S1PR4O95977 384 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 PSMA3P25788 255 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 PTPN7P35236 360 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 CETN2P41208 172 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 CARSP49589 748 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 EIF3EP60228 445 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 OTUD4Q01804 1114 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 OLIG2Q13516 323 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 INAQ16352 499 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 FAM214AQ32MH5 1076 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 DNAJC21Q5F1R6 531 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 SP5Q6BEB4 398 aaPredicted RBP15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 DARS2Q6PI48 645 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 KIRREL2Q6UWL6 708 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 ISLR2Q6UXK2 745 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 MCATQ8IVS2 390 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 TRIM56Q9BRZ2 755 aaKnown RBP15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 LRRC40Q9H9A6 602 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 IGSF5Q9NSI5 407 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 CSAG2Q9Y5P2 127 aa15.12■□□□□ 0.01
HERPUD1-215ENST00000568676 MACROD2A1Z1Q3 448 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 CCL22O00626 93 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 ZG16O60844 167 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 TPBGLP0DKB5 382 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 MAGP20916 626 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 FDXRP22570 491 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 MFAP5Q13361 173 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 ART3Q13508 389 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 RBBP7Q16576 425 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 PARP6Q2NL67 630 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 VSTM4Q8IW00 320 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 PIANPQ8IYJ0 282 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 TTC29Q8NA56 475 aaPredicted RBP15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 RELTQ969Z4 430 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 CNDP1Q96KN2 507 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 TSSK1BQ9BXA7 367 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 C10orf88Q9H8K7 445 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 CUTCQ9NTM9 273 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 OLAHQ9NV23 265 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 COPG2Q9UBF2 871 aa15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 KLF2Q9Y5W3 355 aaPredicted RBP15.11■□□□□ 0.01
HERPUD1-215ENST00000568676 ARHGAP10A1A4S6 786 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 BHMG1C9JSJ3 638 aaPredicted RBP15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 PRSS44E7EML9 344 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 MASP2O00187 686 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 PJA2O43164 708 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 PSMD3O43242 534 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 SRPX2O60687 465 aaPredicted RBP15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 TJP3O95049 919 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 CTSBP07858 339 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 MSNP26038 577 aaKnown RBP15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 PEBP1P30086 187 aaKnown RBP15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 PKLRP30613 574 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 CTNNA1P35221 906 aaKnown RBP15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 MAGEA1P43355 309 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 MARCKSL1P49006 195 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 RIPPLY3P57055 190 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 P3H1Q32P28 736 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 KCTD11Q693B1 232 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 OR11G2Q8NGC1 345 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 CCDC110Q8TBZ0 833 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 ZUFSPQ96AP4 578 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 THOC3Q96J01 351 aaKnown RBP15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 ZNF285Q96NJ3 590 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 RAB11FIP5Q9BXF6 653 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 OSBPL8Q9BZF1 889 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 GOLPH3Q9H4A6 298 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 PCDHA3Q9Y5H8 950 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 ANKRD12Q6UB98 2062 aa15.1■□□□□ 0.01
HERPUD1-215ENST00000568676 FITM1A5D6W6 292 aa15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 VSTM2BA6NLU5 285 aa15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 TARM1B6A8C7 271 aa15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 JRKO75564 520 aa15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 USP1O94782 785 aa15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 HPP00738 406 aa15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 ATXN8OSP0DMR3 200 aa15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 CD9P21926 228 aa15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 PTGER4P35408 488 aa15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 PPARGP37231 505 aaPredicted RBP15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 FOXL2P58012 376 aa15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 BRD3Q15059 726 aa15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.09■□□□□ 0.01
HERPUD1-215ENST00000568676 MTFR2Q6P444 385 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms