RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 NACA2Q9H009 215 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 DUSP21Q9H596 190 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 AREL1O15033 823 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SUOXP51687 545 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 FXNQ16595 210 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SYT6Q5T7P8 510 aaPredicted RBP20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 AFMIDQ63HM1 303 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SVOPQ8N4V2 548 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ATP6V0D2Q8N8Y2 350 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 NPLOC4Q8TAT6 608 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PYURFQ96I23 114 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PLSCR3Q9NRY6 295 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 KRT84Q9NSB2 600 aa20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZNF490Q9ULM2 529 aaPredicted RBP20.03■□□□□ 0.8
MAP1LC3B-206ENST00000564844 HOXC13P31276 330 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TGFBR2P37173 567 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 VLDLRP98155 873 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SEMG2Q02383 582 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ACOX1Q15067 660 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SPATS1Q496A3 300 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 HORMAD1Q86X24 394 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 P3H2Q8IVL5 708 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 OR52J3Q8NH60 311 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 EFHD2Q96C19 240 aaPredicted RBP20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SLC10A4Q96EP9 437 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TTYH2Q9BSA4 534 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PRRG3Q9BZD7 231 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 KATNBL1Q9H079 304 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 RERGLQ9H628 205 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ADPRHL2Q9NX46 363 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 GPRC5BQ9NZH0 403 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TNFRSF1BP20333 461 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 RYKP34925 604 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 HNRNPFP52597 415 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 RPP38P78345 283 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 GRIK2Q13002 908 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZNF648Q5T619 568 aaPredicted RBP20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 UMODL1-AS1Q8N2C9 162 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MINDY2Q8NBR6 621 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 OR8J3Q8NGG0 315 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 RDH12Q96NR8 316 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PPP1R2P1Q96PQ5 205 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 COPS4Q9BT78 406 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CENPOQ9BU64 300 aa20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 THG1LQ9NWX6 298 aaKnown RBP20.02■□□□□ 0.8
MAP1LC3B-206ENST00000564844 AGAP5A6NIR3 686 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PDZK1P1A8MUH7 402 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CTDSP2O14595 271 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 RGS5O15539 181 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 GLUD1P00367 558 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 FGF1P05230 155 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TACR1P25103 407 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 S100A5P33763 92 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ARHGDIAP52565 204 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CYP27C1Q4G0S4 372 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ZNF551Q7Z340 670 aaPredicted RBP20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 HIPK1Q86Z02 1210 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 RGL4Q8IZJ4 473 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NKAPQ8N5F7 415 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CDK5RAP1Q96SZ6 601 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 HEBP1Q9NRV9 189 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NAALAD2Q9Y3Q0 740 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TESMINQ9Y4I5 508 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 N6AMT1Q9Y5N5 214 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ARNTLO00327 626 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SLC16A6O15403 523 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 DYRK3O43781 588 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ODC1P11926 461 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 EIF4EBP2Q13542 120 aaPredicted RBP20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SF1Q15637 639 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CCL14Q16627 93 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 FAM171A1Q5VUB5 890 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 AGMOQ6ZNB7 445 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 EFL1Q7Z2Z2 1120 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CYP2U1Q7Z449 544 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TLK2Q86UE8 772 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CHPFQ8IZ52 775 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TCAIMQ8N3R3 496 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NEDD4LQ96PU5 975 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ZNF382Q96SR6 550 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CLSTN3Q9BQT9 956 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TRIM39Q9HCM9 518 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 C1orf109Q9NX04 203 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 OSGIN1Q9UJX0 560 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 DLGAP4Q9Y2H0 992 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PRG3Q9Y2Y8 225 aaPredicted RBP20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TNS1Q9HBL0 1735 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 HUNKP57058 714 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 MAD2L1BPQ15013 274 aaPredicted RBP20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 KIAA0040Q15053 153 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TIGD6Q17RP2 521 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 C10orf120Q5SQS8 335 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PDE12Q6L8Q7 609 aaKnown RBP20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 BBS2Q9BXC9 721 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 RNF6Q9Y252 685 aa20.01■□□□□ 0.79
MAP1LC3B-206ENST00000564844 STX16O14662 325 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TLL1O43897 1013 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 POU2F1P14859 743 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 RHOQP17081 205 aa20■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TAB1Q15750 504 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms