RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 GNPTGQ9UJJ9 305 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 VPS4AQ9UN37 437 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 CDYLQ9Y232 598 aa11.74□□□□□ -0.53
GTF3C1-204ENST00000564664 ALBP02768 609 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 ETS1P14921 441 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 RPL22P35268 128 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 CCNFP41002 786 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 FOLR3P41439 243 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 SOX8P57073 446 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 SARNPP82979 210 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 NKAIN1Q4KMZ8 207 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 TCTE1Q5JU00 501 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 MLIPQ5VWP3 458 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 PTRHD1Q6GMV3 140 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 SDCCAG8Q86SQ7 713 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 MCATQ8IVS2 390 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 FDCSPQ8NFU4 85 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 OR2L8Q8NGY9 312 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 CPT1CQ8TCG5 803 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 MAGEC3Q8TD91 643 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 PNPLA2Q96AD5 504 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 RAD51AP1Q96B01 352 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 FOPNLQ96NB1 174 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 MRM3Q9HC36 420 aaKnown RBP11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 TREX1Q9NSU2 369 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 GPR83Q9NYM4 423 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 IFT80Q9P2H3 777 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 SLC39A10Q9ULF5 831 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 MAP4K5Q9Y4K4 846 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 COL12A1Q99715 3063 aa11.73□□□□□ -0.53
GTF3C1-204ENST00000564664 H3BMM5 538 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 RASGRF2O14827 1237 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 ZNF185O15231 689 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 SRPX2O60687 465 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 NDUFS3O75489 264 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 IPO13O94829 963 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 SORBS2O94875 1100 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 ALPPP05187 535 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 CBSLP0DN79 551 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 CBSP35520 551 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 ADARP55265 1226 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 SESN2P58004 480 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 CHAF1BQ13112 559 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 SEMA3AQ14563 771 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 NAA25Q14CX7 972 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 SIX1Q15475 284 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 FAM214AQ32MH5 1076 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 RNF187Q5TA31 235 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 VWA5B1Q5TIE3 1220 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 MRNIPQ6NTE8 343 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 JMJD6Q6NYC1 403 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 MRPL14Q6P1L8 145 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 LRRC8BQ6P9F7 803 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 NAPRTQ6XQN6 538 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 GSTA5Q7RTV2 222 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 OTOAQ7RTW8 1153 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 TRIM73Q86UV7 250 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 ZNF655Q8N720 491 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 CLEC1AQ8NC01 280 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 HMGCLL1Q8TB92 370 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 FKBP10Q96AY3 582 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 VPS50Q96JG6 964 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 MENTQ9BUN1 341 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 KIFC1Q9BW19 673 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 P2RY12Q9H244 342 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 SLAMF7Q9NQ25 335 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 IRAK4Q9NWZ3 460 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 PTRH2Q9Y3E5 179 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 KLK4Q9Y5K2 254 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 ANKRD12Q6UB98 2062 aa11.72□□□□□ -0.53
GTF3C1-204ENST00000564664 MAGEB16A2A368 324 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 CCDC175P0C221 793 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 ZSCAN5DPP0CG00 497 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 GP1BBP13224 206 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 TPSB2P20231 275 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 ALAS2P22557 587 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 ATP5DP30049 168 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 PEBP1P30086 187 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 OTX2P32243 289 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 GCGRP47871 477 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 CSE1LP55060 971 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 ATP1A4Q13733 1029 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 GRB7Q14451 532 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 GRM7Q14831 915 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 SF1Q15637 639 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 TPSAB1Q15661 275 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 NADK2Q4G0N4 442 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 DCAF10Q5QP82 559 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 FHL5Q5TD97 284 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 FIGLAQ6QHK4 219 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 IGFL3Q6UXB1 125 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 MICALCLQ6ZW33 695 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 OVCH1Q7RTY7 1134 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 MRGPREQ86SM8 312 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 VRK3Q8IV63 474 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 LMNTD1Q8N9Z9 388 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 LINC01555Q8NAE3 123 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 TRIM58Q8NG06 486 aa11.71□□□□□ -0.53
GTF3C1-204ENST00000564664 CFAP61Q8NHU2 1237 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms