RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 C16orf46Q6P387 395 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 CDHR3Q6ZTQ4 885 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 LURAP1LQ8IV03 231 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 GPR135Q8IZ08 494 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 C17orf53Q8N3J3 647 aaPredicted RBP17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 OR1L3Q8NH93 324 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 FLVCR1-AS1Q8TAF5 88 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 SNF8Q96H20 258 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 MENTQ9BUN1 341 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 RUVBL2Q9Y230 463 aaKnown RBP17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 MRPS18BQ9Y676 258 aaKnown RBP17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 E7EQ34 232 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 HAUS5O94927 633 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 MATN4O95460 622 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 ERVK-10P10266 1014 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 F8A1P23610 371 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 PEBP1P30086 187 aaKnown RBP17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 CLCN7P51798 805 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 ITGA1P56199 1179 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 ARL4CP56559 192 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 ETF1P62495 437 aaKnown RBP17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 MPP1Q00013 466 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 C19orf57Q0VDD7 668 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 CDC20Q12834 499 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 KLHL38Q2WGJ6 581 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 HP1BP3Q5SSJ5 553 aaPredicted RBP17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 PRAMEF17Q5VTA0 474 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 FAM199XQ6PEV8 388 aaPredicted RBP17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 TAX1BP1Q86VP1 789 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 LINC01555Q8NAE3 123 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 CT55Q8WUE5 264 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 KCNJ9Q92806 393 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 MR1Q95460 341 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 TWSG1Q9GZX9 223 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 FAM60AQ9NP50 221 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 IGSF5Q9NSI5 407 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 KLHL42Q9P2K6 505 aa17.7■□□□□ 0.42
SYNGR3-204ENST00000564642 C21orf140B9A014 251 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 NDC80O14777 642 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 ELK3P41970 407 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 RPS15P62841 145 aaKnown RBP17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 DNASE1L3Q13609 305 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 SF1Q15637 639 aaKnown RBP17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 ZIC1Q15915 447 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 HIF1AQ16665 826 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 CRTC2Q53ET0 693 aaPredicted RBP17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 ZNF549Q6P9A3 640 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 BORAQ6PGQ7 559 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 SYT10Q6XYQ8 523 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 LMNTD1Q8N9Z9 388 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 C2CD4AQ8NCU7 369 aaPredicted RBP17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 BBOF1Q8ND07 529 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 INPP5DQ92835 1189 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 LRRC39Q96DD0 335 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 MED8Q96G25 268 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 CFAP36Q96G28 342 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 PWWP2AQ96N64 755 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 LRFN5Q96NI6 719 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 CHRNA10Q9GZZ6 450 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 ACTR5Q9H9F9 607 aaPredicted RBP17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 AKIRIN1Q9H9L7 192 aaPredicted RBP17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 PPANQ9NQ55 473 aaKnown RBP17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 FAM114A2Q9NRY5 505 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 INTS7Q9NVH2 962 aaKnown RBP17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 ZC3H7BQ9UGR2 993 aaKnown RBP17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 CHMP2BQ9UQN3 213 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 DHRS7Q9Y394 339 aa17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 SNRNP200O75643 2136 aaKnown RBP17.69■□□□□ 0.42
SYNGR3-204ENST00000564642 MEN1O00255 615 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 VPS26AO75436 327 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 SEC31AO94979 1220 aaKnown RBP17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 CATP04040 527 aaKnown RBP17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 HBQ1P09105 142 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 SFTPCP11686 197 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 MAGP20916 626 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 CARSP49589 748 aaKnown RBP17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 GPS2Q13227 327 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 CUL1Q13616 776 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 ERV3-1Q14264 604 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 PCM1Q15154 2024 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 DEFB110Q30KQ9 67 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 CCSMST1Q4G0I0 132 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 UGT3A1Q6NUS8 523 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 NEK10Q6ZWH5 1172 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 MAATS1Q7Z4T9 603 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 IGDCC3Q8IVU1 814 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 FAM20CQ8IXL6 584 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 DSELQ8IZU8 1212 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 SLC38A9Q8NBW4 561 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 SPATA4Q8NEY3 305 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 CERS2Q96G23 380 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 GPR21Q99679 349 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 SLC30A3Q99726 388 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 AARSD1Q9BTE6 412 aaKnown RBP17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 GPR87Q9BY21 358 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 IRAK4Q9NWZ3 460 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 SPATA7Q9P0W8 599 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 SNX24Q9Y343 169 aa17.68■□□□□ 0.42
SYNGR3-204ENST00000564642 PCDHGA6Q9Y5G7 932 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms