RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ANKRD20A2Q5SQ80 823 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 ANKRD20A1Q5TYW2 823 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 ANKRD20A3Q5VUR7 823 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 SHEQ5VZ18 495 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 MFSD12Q6NUT3 480 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 ALKBH5Q6P6C2 394 aaKnown RBP3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 TMEM270Q6UE05 265 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 SLC9B2Q86UD5 537 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 NFE4Q86UQ8 179 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 SFRP1Q8N474 314 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 C10orf53Q8N6V4 93 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 KBTBD3Q8NAB2 608 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 GRAPLQ8TC17 118 aaPredicted RBP3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 CD101Q93033 1021 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 LINGO1Q96FE5 620 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 SCRN2Q96FV2 425 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 THOC1Q96FV9 657 aaKnown RBP3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 MUS81Q96NY9 551 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 SLX1AQ9BQ83 275 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 TRAF4Q9BUZ4 470 aaPredicted RBP3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 MOV10L1Q9BXT6 1211 aaKnown RBP3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 SLC5A7Q9GZV3 580 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 WNT5BQ9H1J7 359 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 MINDY3Q9H8M7 445 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 TRPC7Q9HCX4 862 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 ABCB8Q9NUT2 735 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 STK26Q9P289 416 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 IL17BQ9UHF5 180 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 GMEB2Q9UKD1 530 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 TMED3Q9Y3Q3 217 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 A0A087WYN8 130 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 BMPR1BO00238 502 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 CLDN4O14493 209 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 GAS8-AS1O95177 125 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 BAG4O95429 457 aaKnown RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 LDLRP01130 860 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 INHBAP08476 426 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 THEGLP0DJG4 465 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 CETPP11597 493 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 P4HA1P13674 534 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ADRA2CP18825 462 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 TCEA1P23193 301 aaKnown RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 EEF1B2P24534 225 aaKnown RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ACAT1P24752 427 aaKnown RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 PSMB4P28070 264 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 CDC25CP30307 473 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 TCF7P36402 384 aaPredicted RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 FMO5P49326 533 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 MMP15P51511 669 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ACTN3Q08043 901 aaPredicted RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ARL16Q0P5N6 197 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ITGA7Q13683 1181 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 NR1D2Q14995 579 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 MEP1BQ16820 701 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 UGP2Q16851 508 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ZNF718Q3SXZ3 478 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 PHLDA2Q53GA4 152 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 GLRA4Q5JXX5 417 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 C6orf136Q5SQH8 315 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 CCNYL2Q5T2Q4 361 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 C11orf88Q6PI97 169 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 PACS1Q6VY07 963 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ZNF852Q6ZMS4 543 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 KCTD8Q6ZWB6 473 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 NUP54Q7Z3B4 507 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 PIWIL4Q7Z3Z4 852 aaKnown RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ABI3BPQ7Z7G0 1075 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 SMIM29Q86T20 159 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 CRYBG2Q8N1P7 616 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ARHGAP24Q8N264 748 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 METTL27Q8N6F8 245 aaPredicted RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 MAB21L3Q8N8X9 362 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ATAD1Q8NBU5 361 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 PAPD5Q8NDF8 572 aaKnown RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 DBF4BQ8NFT6 615 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ST7LQ8TDW4 575 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 CCDC43Q96MW1 224 aaKnown RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 SPATA33Q96N06 139 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 PARK7Q99497 189 aaKnown RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 HNRNPABQ99729 332 aaKnown RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 INPP5KQ9BT40 448 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 POLR3CQ9BUI4 534 aaPredicted RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 SLC2A11Q9BYW1 496 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 FN3KQ9H479 309 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 Q9N2K0 584 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ADPRHL2Q9NX46 363 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 DONSONQ9NYP3 566 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ITGA11Q9UKX5 1188 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 MTUS1Q9ULD2 1270 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ABT1Q9ULW3 272 aaKnown RBP3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ICAM5Q9UMF0 924 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 SNX7Q9UNH6 387 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 SCN5AQ14524 2016 aa3.05□□□□□ -1.92
SHCBP1-202ENST00000563219 ACEP12821 1306 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 A0A0A6YYC8 382 aaPredicted RBP3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 TEX13DA0A0J9YY54 714 aaPredicted RBP3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 A0A1W2PPI3 338 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 A0A1W2PPW3 197 aa3.04□□□□□ -1.92
SHCBP1-202ENST00000563219 TMEM221A6NGB7 291 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms