RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ITGB8P26012 769 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 ADORA1P30542 326 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 SSTR2P30874 369 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 APOBEC1P41238 236 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 CSE1LP55060 971 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 KRTAP10-9P60411 292 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 SEC61A1P61619 476 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 EEF1A1P68104 462 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 PPP2R2BQ00005 443 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 TSPY1Q01534 308 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 TFCP2Q12800 502 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 MYBPHQ13203 477 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 ALCAMQ13740 583 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 NR1D2Q14995 579 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 DLG2Q15700 870 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 SYT16Q17RD7 645 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 CCDC96Q2M329 555 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 ZNF585BQ52M93 769 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 SPECC1Q5M775 1068 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 PAPPA-AS1Q5QFB9 102 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 EEF1A1P5Q5VTE0 462 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 RPUSD3Q6P087 351 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 PLEKHM3Q6ZWE6 761 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 CREB3L2Q70SY1 520 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 MEPCEQ7L2J0 689 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 CCDC186Q7Z3E2 898 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 LDB1Q86U70 411 aaPredicted RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 AACSQ86V21 672 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 ERC1Q8IUD2 1116 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 MAP7D3Q8IWC1 876 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 CHERPQ8IWX8 916 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 RASGEF1CQ8N431 466 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 SLC38A9Q8NBW4 561 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 RDM1Q8NG50 284 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 OR2AK2Q8NG84 335 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 B4GALNT2Q8NHY0 566 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 TMED6Q8WW62 240 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 TANKQ92844 425 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 PIGTQ969N2 578 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 MIB2Q96AX9 1013 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 RMDN1Q96DB5 314 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 PGAP3Q96FM1 320 aaPredicted RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 TMEM19Q96HH6 336 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 ZNF479Q96JC4 524 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 NEK1Q96PY6 1258 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 TEX13BQ9BXU2 312 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 UPF3BQ9BZI7 483 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 CRNKL1Q9BZJ0 848 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 TM6SF1Q9BZW5 370 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 HIPK2Q9H2X6 1198 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 VCPKMTQ9H867 229 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 PIH1D3Q9NQM4 214 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 AATFQ9NY61 560 aaKnown RBP eCLIP3.61□□□□□ -1.83
HERC1-215ENST00000561436 RCC2Q9P258 522 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 CTNNA3Q9UI47 895 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 MKI67P46013 3256 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 SCN9AQ15858 1988 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 LACTBL1A8MY62 500 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 ZNF217O75362 1048 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 CLDN14O95500 239 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 TRUB2O95900 331 aaKnown RBP3.6□□□□□ -1.83
HERC1-215ENST00000561436 BCL10O95999 233 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 PGK1P00558 417 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 FYNP06241 537 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 ASGR1P07306 291 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 CSF2RAP15509 400 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 HRH2P25021 359 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 CCKARP32238 428 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 NT5C2P49902 561 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 CCR3P51677 355 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 ZNF75DP51815 510 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 TERF1P54274 439 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 CLDN20P56880 219 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 PLIN5Q00G26 463 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 POU5F1Q01860 360 aaKnown RBP3.6□□□□□ -1.83
HERC1-215ENST00000561436 SLC39A14Q15043 492 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 LETM2Q2VYF4 491 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 CBWD6Q4V339 395 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 ASPRV1Q53RT3 343 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 KRTCAP3Q53RY4 240 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 CBWD3Q5JTY5 395 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 CST9LP1Q5W188 147 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 LCN10Q6JVE6 187 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 RHBDF2Q6PJF5 856 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 SFR1Q86XK3 245 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 NRROSQ86YC3 692 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 GALNT13Q8IUC8 556 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 CLIP4Q8N3C7 705 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 PGBD5Q8N414 524 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 FBXO39Q8N4B4 442 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 C1orf52Q8N6N3 182 aaKnown RBP3.6□□□□□ -1.83
HERC1-215ENST00000561436 SLC38A5Q8WUX1 472 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 RHBDF1Q96CC6 855 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 HDAC11Q96DB2 347 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 RTP4Q96DX8 246 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 SPACA9Q96E40 222 aaPredicted RBP3.6□□□□□ -1.83
HERC1-215ENST00000561436 CFAP57Q96MR6 1250 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 RAB3IPQ96QF0 476 aaPredicted RBP3.6□□□□□ -1.83
HERC1-215ENST00000561436 CSF3RQ99062 836 aa3.6□□□□□ -1.83
HERC1-215ENST00000561436 SLX1AQ9BQ83 275 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms