RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 KRT18P05783 430 aaKnown RBP3.68□□□□□ -1.82
HERC1-211ENST00000560983 PLEKP08567 350 aaPredicted RBP3.68□□□□□ -1.82
HERC1-211ENST00000560983 FGF5P12034 268 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 CCNB1P14635 433 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 IDEP14735 1019 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 PPP3CBP16298 524 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 GJB2P29033 226 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 GKP32189 559 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 TSFMP43897 325 aaKnown RBP3.68□□□□□ -1.82
HERC1-211ENST00000560983 CASP4P49662 377 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 ZNF81P51508 661 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 TBX4P57082 545 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 CYP24A1Q07973 514 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 ZNF844Q08AG5 666 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 INCA1Q0VD86 236 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 IL11RAQ14626 422 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 RAB39AQ14964 217 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 SNRNP35Q16560 246 aaKnown RBP3.68□□□□□ -1.82
HERC1-211ENST00000560983 ZNF699Q32M78 642 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 CD300EQ496F6 205 aaPredicted RBP3.68□□□□□ -1.82
HERC1-211ENST00000560983 RAP1GAP2Q684P5 730 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 FCRLBQ6BAA4 426 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 SPOPLQ6IQ16 392 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 MTFR2Q6P444 385 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 SYCP3Q8IZU3 236 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 CIARTQ8N365 385 aaPredicted RBP3.68□□□□□ -1.82
HERC1-211ENST00000560983 NECAB1Q8N987 351 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 OR56A4Q8NGH8 313 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 POC1BQ8TC44 478 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 KIAA1524Q8TCG1 905 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 TMEM158Q8WZ71 300 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 RAD54LQ92698 747 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 RAB7BQ96AH8 199 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 PPP1R16AQ96I34 528 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 FBXL20Q96IG2 436 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 ELMO2Q96JJ3 720 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 TMX3Q96JJ7 454 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 NT5C1BQ96P26 610 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 VKORC1Q9BQB6 163 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 FOXP1Q9H334 677 aaPredicted RBP3.68□□□□□ -1.82
HERC1-211ENST00000560983 MRPL44Q9H9J2 332 aaKnown RBP3.68□□□□□ -1.82
HERC1-211ENST00000560983 ARHGEF38Q9NXL2 777 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 TAAR2Q9P1P5 351 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.68□□□□□ -1.82
HERC1-211ENST00000560983 G3BP2Q9UN86 482 aaKnown RBP3.68□□□□□ -1.82
HERC1-211ENST00000560983 CDYLQ9Y232 598 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 TBC1D30Q9Y2I9 924 aa3.68□□□□□ -1.82
HERC1-211ENST00000560983 MYH10P35580 1976 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 TLCD2A6NGC4 264 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 KCNU1A8MYU2 1149 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 SPTLC2O15270 562 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 TGFB1I1O43294 461 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 HTRA2O43464 458 aaPredicted RBP3.67□□□□□ -1.82
HERC1-211ENST00000560983 CRLF1O75462 422 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 GCNT3O95395 438 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 CD160O95971 181 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 MT-ND3P03897 115 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 HOXC4P09017 264 aaPredicted RBP3.67□□□□□ -1.82
HERC1-211ENST00000560983 ANKRD34CP0C6C1 535 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 AK4P27144 223 aaPredicted RBP3.67□□□□□ -1.82
HERC1-211ENST00000560983 SPAM1P38567 509 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 FASLGP48023 281 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 SOX8P57073 446 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 DAOAP59103 153 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 RPS15P62841 145 aaKnown RBP3.67□□□□□ -1.82
HERC1-211ENST00000560983 KRT85P78386 507 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 EIF4EBP2Q13542 120 aaPredicted RBP3.67□□□□□ -1.82
HERC1-211ENST00000560983 RAPGEF1Q13905 1077 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 SGSM1Q2NKQ1 1148 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 ZNF805Q5CZA5 627 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 CARD16Q5EG05 197 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 CT47A1Q5JQC4 288 aaPredicted RBP3.67□□□□□ -1.82
HERC1-211ENST00000560983 LRRC73Q5JTD7 316 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.67□□□□□ -1.82
HERC1-211ENST00000560983 TSTD2Q5T7W7 516 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 IZUMO3Q5VZ72 239 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 HIST2H2BDQ6DRA6 164 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 LCN10Q6JVE6 187 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 PWWP2BQ6NUJ5 590 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 FBXL22Q6P050 247 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 IGFL2Q6UWQ7 119 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 TTC7BQ86TV6 843 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 RASGRP3Q8IV61 690 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 SCML4Q8N228 414 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 ZADH2Q8N4Q0 377 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 ANKRD52Q8NB46 1076 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 SLC38A9Q8NBW4 561 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 PDPRQ8NCN5 879 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 C1orf162Q8NEQ5 155 aaPredicted RBP3.67□□□□□ -1.82
HERC1-211ENST00000560983 SEMA6DQ8NFY4 1073 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 ATL2Q8NHH9 583 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 NCSTNQ92542 709 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 JADE3Q92613 823 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 DNAJC19Q96DA6 116 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 PBKQ96KB5 322 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 CCDC114Q96M63 670 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 OR6C1Q96RD1 312 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 TAAR6Q96RI8 345 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 PPP1R9BQ96SB3 815 aa3.67□□□□□ -1.82
HERC1-211ENST00000560983 ZDHHC6Q9H6R6 413 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms