RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 KLHL35Q6PF15 583 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 FBXO38Q6PIJ6 1188 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 FAM92BQ6ZTR7 304 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 CLEC14AQ86T13 490 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 TBC1D1Q86TI0 1168 aaPredicted RBP21.07■□□□□ 0.96
SNX1-210ENST00000560260 HMGCLL1Q8TB92 370 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 ZNF480Q8WV37 535 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 GPR78Q96P69 363 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 RAB11FIP5Q9BXF6 653 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 ZNF358Q9NW07 568 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 UTP6Q9NYH9 597 aaKnown RBP21.07■□□□□ 0.96
SNX1-210ENST00000560260 ACTR10Q9NZ32 417 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 TLK1Q9UKI8 766 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 NOVA2Q9UNW9 492 aaKnown RBP21.07■□□□□ 0.96
SNX1-210ENST00000560260 ADAMTS20P59510 1910 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 A0A1W2PNU3 283 aaPredicted RBP21.06■□□□□ 0.96
SNX1-210ENST00000560260 A0A1W2PPM1 405 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 GSAPA4D1B5 854 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 KDM1AO60341 852 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 CCKBRP32239 447 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 SLC26A3P40879 764 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 KCNC1P48547 511 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 ATP6V0D1P61421 351 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 C16orf72Q14CZ0 275 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 SNAP47Q5SQN1 464 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 ANKS6Q68DC2 871 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 ADAMTSL2Q86TH1 951 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 TRIM73Q86UV7 250 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 PLXDC1Q8IUK5 500 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 LRRC56Q8IYG6 542 aaPredicted RBP21.06■□□□□ 0.96
SNX1-210ENST00000560260 IQCKQ8N0W5 287 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 PPFIBP2Q8ND30 876 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 RCBTB1Q8NDN9 531 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 HNRNPLLQ8WVV9 542 aaKnown RBP21.06■□□□□ 0.96
SNX1-210ENST00000560260 DEPDC7Q96QD5 511 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 DPYSL5Q9BPU6 564 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 PCMTD2Q9NV79 361 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 STOX2Q9P2F5 926 aaPredicted RBP21.06■□□□□ 0.96
SNX1-210ENST00000560260 KLK13Q9UKR3 277 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 OARD1Q9Y530 152 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 ANKRD12Q6UB98 2062 aa21.06■□□□□ 0.96
SNX1-210ENST00000560260 TLDC2A0PJX2 215 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 PIPSLA2A3N6 862 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 PMS2P1A4D2B8 440 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 AGRPO00253 132 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 PRICKLE3O43900 615 aaPredicted RBP21.05■□□□□ 0.96
SNX1-210ENST00000560260 CDH16O75309 829 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 MPOP05164 745 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 ENO2P09104 434 aaPredicted RBP21.05■□□□□ 0.96
SNX1-210ENST00000560260 UGT2B7P16662 529 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 TFEBP19484 476 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 PSMB5P28074 263 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 PNLIPRP1P54315 467 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 ZNF844Q08AG5 666 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 IFFO1Q0D2I5 559 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 PHF19Q5T6S3 580 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 LGSNQ5TDP6 509 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 ARHGAP22Q7Z5H3 698 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 CCDC91Q7Z6B0 441 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 ISCA2Q86U28 154 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 FAM20CQ8IXL6 584 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 CACTIN-AS1Q8N1I8 211 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 MCOLN3Q8TDD5 553 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 KIAA1191Q96A73 305 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 ZIM3Q96PE6 472 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 OR2A14Q96R47 310 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 MAP3K3Q99759 626 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 TMEM109Q9BVC6 243 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 ALG9Q9H6U8 611 aa21.05■□□□□ 0.96
SNX1-210ENST00000560260 SNRNP200O75643 2136 aaKnown RBP21.05■□□□□ 0.96
SNX1-210ENST00000560260 A8MU76 341 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 C2orf74A8MZ97 194 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 E7ENX8 843 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 GOLGA8RI6L899 631 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 KLHL2O95198 593 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 ADRB1P08588 477 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 JUPP14923 745 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 H2AFXP16104 143 aaPredicted RBP21.04■□□□□ 0.96
SNX1-210ENST00000560260 PRDX3P30048 256 aaKnown RBP21.04■□□□□ 0.96
SNX1-210ENST00000560260 GLRBP48167 497 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 TAP2Q03519 686 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 PRKAA1Q13131 559 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 KIF26BQ2KJY2 2108 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 ARMC6Q6NXE6 501 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 SUSD1Q6UWL2 747 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 PRSS42Q7Z5A4 293 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 GALNT15Q8N3T1 639 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 ZBTB9Q96C00 473 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 CCDC138Q96M89 665 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 TMEM74Q96NL1 305 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 ATOH8Q96SQ7 321 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 NMRAL1Q9HBL8 299 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 ARL15Q9NXU5 204 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 SEMA5BQ9P283 1151 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 LGALS13Q9UHV8 139 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 IGHV5-51A0A0C4DH38 117 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 TLCD2A6NGC4 264 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 MATN2O00339 956 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 GUCA1CO95843 209 aa21.04■□□□□ 0.96
SNX1-210ENST00000560260 PVRP15151 417 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms