RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 NIPAL4Q0D2K0 466 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 ILF3Q12906 894 aaKnown RBP eCLIP5.75□□□□□ -1.492e-6■■■■□ 21.5
USP3-212ENST00000559276 MMRN1Q13201 1228 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 TRA2AQ13595 282 aaKnown RBP eCLIP5.75□□□□□ -1.49
USP3-212ENST00000559276 ZNF235Q14590 738 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 TPSAB1Q15661 275 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 KBTBD12Q3ZCT8 623 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 MSS51Q4VC12 460 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 COLEC12Q5KU26 742 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 LRRC66Q68CR7 880 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 ANKS6Q68DC2 871 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 ALG1LQ6GMV1 187 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 TMEM71Q6P5X7 295 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 DOK6Q6PKX4 331 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 CLEC18BQ6UXF7 455 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 ADAMTSL4Q6UY14 1074 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 B3GNT6Q6ZMB0 384 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 NLRP8Q86W28 1048 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 SPATA24Q86W54 205 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 ANKMY2Q8IV38 441 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 CDKL3Q8IVW4 592 aaPredicted RBP5.75□□□□□ -1.49
USP3-212ENST00000559276 RBM12BQ8IXT5 1001 aaKnown RBP5.75□□□□□ -1.49
USP3-212ENST00000559276 SFRP1Q8N474 314 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 CLEC18CQ8NCF0 446 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 ICA1LQ8NDH6 482 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 GSDMBQ8TAX9 411 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 ARRDC2Q8TBH0 407 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 DTX3LQ8TDB6 740 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 SLC37A2Q8TED4 501 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 PDCD6IPQ8WUM4 868 aaKnown RBP5.75□□□□□ -1.49
USP3-212ENST00000559276 LRRN4Q8WUT4 740 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 HSPH1Q92598 858 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 CATSPER2Q96P56 530 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 WDR83Q9BRX9 315 aaKnown RBP5.75□□□□□ -1.49
USP3-212ENST00000559276 THTPAQ9BU02 230 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 DDA1Q9BW61 102 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 MRPS26Q9BYN8 205 aaKnown RBP5.75□□□□□ -1.49
USP3-212ENST00000559276 CDH19Q9H159 772 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 SLC25A18Q9H1K4 315 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 ZNF696Q9H7X3 374 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.75□□□□□ -1.49
USP3-212ENST00000559276 PCMTD2Q9NV79 361 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 SEPT10Q9P0V9 454 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 DCDC2Q9UHG0 476 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 PILRAQ9UKJ1 303 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 CNOT11Q9UKZ1 510 aaKnown RBP5.75□□□□□ -1.49
USP3-212ENST00000559276 PRKAB1Q9Y478 270 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 TTLL3Q9Y4R7 772 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 PTPN13Q12923 2485 aa5.75□□□□□ -1.49
USP3-212ENST00000559276 A0A0J9YYE9 177 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 LOC101059948A0A1B0GTJ6 334 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 FAM237BA0A1B0GVD1 139 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 WDR91A4D1P6 747 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 PRR19A6NJB7 356 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 EFCAB7A8K855 629 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 FADS2P1A8MWK0 482 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 TMEM114B3SHH9 223 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 B4E171 279 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 NKX2-8O15522 239 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 MFSD11O43934 449 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 RAD1O60671 282 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 RFPL1O75677 317 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 MAP3K6O95382 1288 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 CLDN7O95471 211 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 TRBC1P01850 177 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 APOA4P06727 396 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 MMP2P08253 660 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 UBTFL6P0CB48 400 aaPredicted RBP5.74□□□□□ -1.49
USP3-212ENST00000559276 CYP2A6P11509 494 aaPredicted RBP5.74□□□□□ -1.49
USP3-212ENST00000559276 ETS1P14921 441 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 MX2P20592 715 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 GJC1P36383 396 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 TSPAN7P41732 249 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 GPR1P46091 355 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 AQP5P55064 265 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 CDH6P55285 790 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 BASP1P80723 227 aaKnown RBP5.74□□□□□ -1.49
USP3-212ENST00000559276 MC2RQ01718 297 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 DSC2Q02487 901 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 TLE1Q04724 770 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 GALNT2Q10471 571 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 SLC10A2Q12908 348 aaPredicted RBP5.74□□□□□ -1.49
USP3-212ENST00000559276 FRG1Q14331 258 aaKnown RBP5.74□□□□□ -1.49
USP3-212ENST00000559276 EFTUD2Q15029 972 aaKnown RBP eCLIP5.74□□□□□ -1.49
USP3-212ENST00000559276 PAFAH1B3Q15102 231 aaKnown RBP5.74□□□□□ -1.49
USP3-212ENST00000559276 PDK3Q15120 406 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 LLGL1Q15334 1064 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 CHI3L2Q15782 390 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 KCTD19Q17RG1 926 aaPredicted RBP5.74□□□□□ -1.49
USP3-212ENST00000559276 MMEL1Q495T6 779 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 ATP13A4Q4VNC1 1196 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 BOLA3Q53S33 107 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 RALGPS1Q5JS13 557 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 CFAP157Q5JU67 520 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 ARMC12Q5T9G4 340 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 OGFRL1Q5TC84 451 aaPredicted RBP5.74□□□□□ -1.49
USP3-212ENST00000559276 MARC1Q5VT66 337 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 IRAK1BP1Q5VVH5 260 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 ANKRD22Q5VYY1 191 aa5.74□□□□□ -1.49
USP3-212ENST00000559276 STEAP4Q687X5 459 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms