RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 AP1B1Q10567 949 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 GTF2H3Q13889 308 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 PTPRRQ15256 657 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 CDO1Q16878 200 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 VWA3BQ502W6 1294 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 ANKRD20A8PQ5CZ79 823 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 PDPK2PQ6A1A2 396 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 TIGD7Q6NT04 549 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-245ENST00000556958 FAM173BQ6P4H8 233 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 STRADAQ7RTN6 431 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 AMZ2Q86W34 360 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 CHERPQ8IWX8 916 aaKnown RBP5.48□□□□□ -1.53
ATXN3-245ENST00000556958 FAM20CQ8IXL6 584 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 ZNF655Q8N720 491 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-245ENST00000556958 NTAN1Q96AB6 310 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 MRRFQ96E11 262 aaKnown RBP5.48□□□□□ -1.53
ATXN3-245ENST00000556958 FRMD6Q96NE9 622 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 CRB3Q9BUF7 120 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 SPATA16Q9BXB7 569 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 PITPNM3Q9BZ71 974 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 SLC39A8Q9C0K1 460 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 KLHL25Q9H0H3 589 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 SRMSQ9H3Y6 488 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 SOX17Q9H6I2 414 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-245ENST00000556958 NOD2Q9HC29 1040 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 ACP6Q9NPH0 428 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 RAD18Q9NS91 495 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 SLC22A11Q9NSA0 550 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 SAMSN1Q9NSI8 373 aaKnown RBP5.48□□□□□ -1.53
ATXN3-245ENST00000556958 IMP3Q9NV31 184 aaKnown RBP5.48□□□□□ -1.53
ATXN3-245ENST00000556958 RIC8BQ9NVN3 520 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 VTI1BQ9UEU0 232 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 ADGRE2Q9UHX3 823 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 SLC24A2Q9UI40 661 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 TMEM59LQ9UK28 342 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 CBLCQ9ULV8 474 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 VPS13CQ709C8 3753 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 LRP4O75096 1905 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 A0A1B0GTH9 108 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 A0A1B0GX78 115 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 C2orf74A8MZ97 194 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 GOLGA8SH3BPF8 625 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 DDX3XO00571 662 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATXN3-245ENST00000556958 MTHFD1P11586 935 aaKnown RBP5.47□□□□□ -1.53
ATXN3-245ENST00000556958 UGT1A1P22309 533 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 SSTR4P31391 388 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 UQCRC1P31930 480 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 RFC1P35251 1148 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-245ENST00000556958 THBS2P35442 1172 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 NUP107P57740 925 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 APBA1Q02410 837 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 OCA2Q04671 838 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 TRAF2Q12933 501 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 GPRC6AQ5T6X5 926 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 ARHGAP11AQ6P4F7 1023 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 SHISA6Q6ZSJ9 500 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 TTLL10Q6ZVT0 673 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-245ENST00000556958 TRAPPC5Q8IUR0 188 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 MCATQ8IVS2 390 aaKnown RBP5.47□□□□□ -1.53
ATXN3-245ENST00000556958 OR5M3Q8NGP4 307 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 GPR150Q8NGU9 434 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 SGMS2Q8NHU3 365 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 BRSK1Q8TDC3 778 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 NSMCE1Q8WV22 266 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 LCN9Q8WX39 176 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 ROBO4Q8WZ75 1007 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 GLYATL1Q969I3 302 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 CELF6Q96J87 481 aaKnown RBP5.47□□□□□ -1.53
ATXN3-245ENST00000556958 TMX3Q96JJ7 454 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 ZNF354BQ96LW1 612 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 NSMCE3Q96MG7 304 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 ZNF396Q96N95 335 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-245ENST00000556958 SIGLEC12Q96PQ1 595 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 WDR24Q96S15 920 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 OLFM1Q99784 485 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 UTP23Q9BRU9 249 aaKnown RBP5.47□□□□□ -1.53
ATXN3-245ENST00000556958 YIPF4Q9BSR8 244 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 ZSCAN5AQ9BUG6 496 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 MAGEB5Q9BZ81 275 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 XPO4Q9C0E2 1151 aaKnown RBP5.47□□□□□ -1.53
ATXN3-245ENST00000556958 CHRNA10Q9GZZ6 450 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 LACRTQ9GZZ8 138 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 DEF6Q9H4E7 631 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 ARFGAP3Q9NP61 516 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 KLHL1Q9NR64 748 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 GNPTGQ9UJJ9 305 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 C3orf18Q9UK00 162 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 CDC42EP3Q9UKI2 254 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 PSMD13Q9UNM6 376 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 HEBP2Q9Y5Z4 205 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 PIKFYVEQ9Y2I7 2098 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 MGAM2Q2M2H8 2515 aa5.47□□□□□ -1.53
ATXN3-245ENST00000556958 TGP01266 2768 aa5.46□□□□□ -1.53
ATXN3-245ENST00000556958 CHD5Q8TDI0 1954 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 CACNA1CQ13936 2221 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 C1orf232A0A0U1RR37 186 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 HYKKA2RU49 373 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 KLHL33A6NCF5 533 aa5.46□□□□□ -1.54
ATXN3-245ENST00000556958 TUBAL3A6NHL2 446 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms