RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 BEX4Q9NWD9 120 aaPredicted RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 SLC17A6Q9P2U8 582 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 FETUBQ9UGM5 382 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 APPL1Q9UKG1 709 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 TSPAN16Q9UKR8 245 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 AURKCQ9UQB9 309 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 DRG1Q9Y295 367 aaKnown RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 SCN1AP35498 2009 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 GAGE10A6NGK3 116 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 GOLGA8SH3BPF8 625 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 J3KTA2 159 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 VPS4BO75351 444 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 DNAJB5O75953 348 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 RECQL5O94762 991 aaPredicted RBP5.08□□□□□ -1.6
SRP54-211ENST00000556445 IFNB1P01574 187 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 ASGR1P07306 291 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 CHRM2P08172 466 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 MYZAPP0CAP1 466 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 RALAP11233 206 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 PDGFRAP16234 1089 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 ZFXP17010 805 aaPredicted RBP5.08□□□□□ -1.6
SRP54-211ENST00000556445 TMEM11P17152 192 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 CHRM3P20309 590 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 SDC4P31431 198 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 ASMTP46597 345 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 RABIFP47224 123 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 MARCKSL1P49006 195 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 NPY4RP50391 375 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 UCP3P55916 312 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 WNT3P56703 355 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 NXPH1P58417 271 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 GMFBP60983 142 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 YPEL5P62699 121 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 PRKCZQ05513 592 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 SCN1BQ07699 218 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 ATP1A4Q13733 1029 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 PTK6Q13882 451 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 BOP1Q14137 746 aaKnown RBP5.08□□□□□ -1.6
SRP54-211ENST00000556445 RCN2Q14257 317 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 SIX1Q15475 284 aaPredicted RBP5.08□□□□□ -1.6
SRP54-211ENST00000556445 PTGISQ16647 500 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 SOWAHAQ2M3V2 549 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 GOLGA7BQ2TAP0 167 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 HFEQ30201 348 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 EFHC1Q5JVL4 640 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 COLEC12Q5KU26 742 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 TMEM154Q6P9G4 183 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 SYCE2Q6PIF2 218 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 CXCL17Q6UXB2 119 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 C4orf22Q6V702 233 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 TRMT10CQ7L0Y3 403 aaKnown RBP5.08□□□□□ -1.6
SRP54-211ENST00000556445 SLC26A9Q7LBE3 791 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 GSTA5Q7RTV2 222 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 HOOK3Q86VS8 718 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 TMEM200AQ86VY9 491 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 CNTN4Q8IWV2 1026 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 IQCKQ8N0W5 287 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 FAM71DQ8N9W8 422 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 B3GALNT2Q8NCR0 500 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 TRPV1Q8NER1 839 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 FAM76AQ8TAV0 307 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 RAET1EQ8TD07 263 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 WDR60Q8WVS4 1066 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 TEKT4Q8WW24 435 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 VOPP1Q96AW1 172 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 C18orf25Q96B23 403 aaPredicted RBP5.08□□□□□ -1.6
SRP54-211ENST00000556445 HAUS1Q96CS2 278 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 SNF8Q96H20 258 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 GLT1D1Q96MS3 346 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 SLITRK1Q96PX8 696 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 PPP1R10Q96QC0 940 aaKnown RBP5.08□□□□□ -1.6
SRP54-211ENST00000556445 CPXM1Q96SM3 734 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 HNRNPABQ99729 332 aaKnown RBP5.08□□□□□ -1.6
SRP54-211ENST00000556445 SH3GL2Q99962 352 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 ZPBPQ9BS86 351 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 TRIM62Q9BVG3 475 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 AMBRA1Q9C0C7 1298 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 SIK2Q9H0K1 926 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 SDCBP2Q9H190 292 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 DPH5Q9H2P9 285 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 TTYH1Q9H313 450 aaPredicted RBP5.08□□□□□ -1.6
SRP54-211ENST00000556445 STN1Q9H668 368 aaKnown RBP5.08□□□□□ -1.6
SRP54-211ENST00000556445 SCPEP1Q9HB40 452 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 FSCN3Q9NQT6 498 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 MBNL1Q9NR56 388 aaKnown RBP5.08□□□□□ -1.6
SRP54-211ENST00000556445 SERINC1Q9NRX5 453 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 DKK4Q9UBT3 224 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 ASIC3Q9UHC3 531 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 ADAM21Q9UKJ8 722 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 GABRQQ9UN88 632 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 ST3GAL5Q9UNP4 418 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 ENTPD2Q9Y5L3 495 aa5.08□□□□□ -1.6
SRP54-211ENST00000556445 hCG_1818297A0A087WSY0 165 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 A0A0U1RQF3 1178 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 LRRC3CA6NJW4 275 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 C2CD4BA6NLJ0 364 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 KBTBD13C9JR72 458 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 F5H697 171 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 F8VP50 259 aa5.07□□□□□ -1.6
SRP54-211ENST00000556445 APOC4-APOC2K7ER74 178 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms