RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 IP6K3Q96PC2 410 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 MFRPQ9BY79 579 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 EIF2B3Q9NR50 452 aaKnown RBP21.75■■□□□ 1.07
ACTN1-220ENST00000556433 EURLQ9NYK6 297 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.75■■□□□ 1.07
ACTN1-220ENST00000556433 RP1L1Q8IWN7 2480 aaPredicted RBP21.74■■□□□ 1.07
ACTN1-220ENST00000556433 LRRK2Q5S007 2527 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 SLCO2B1O94956 709 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 MAGP20916 626 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 ALAS2P22557 587 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 NPY2RP49146 381 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 RAPSNQ13702 412 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 GRB7Q14451 532 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 NKAIN1Q4KMZ8 207 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 C4orf22Q6V702 233 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 GSTA5Q7RTV2 222 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 MRGPREQ86SM8 312 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 TAX1BP1Q86VP1 789 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 HPS6Q86YV9 775 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 MCATQ8IVS2 390 aaKnown RBP21.74■■□□□ 1.07
ACTN1-220ENST00000556433 GALNT11Q8NCW6 608 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 GSDMBQ8TAX9 411 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 MENTQ9BUN1 341 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 SLC39A10Q9ULF5 831 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 MAP4K5Q9Y4K4 846 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 RELNP78509 3460 aa21.74■■□□□ 1.07
ACTN1-220ENST00000556433 NAV2Q8IVL1 2488 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 PEX12O00623 359 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 NDUFS3O75489 264 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 SORBS2O94875 1100 aaKnown RBP21.73■■□□□ 1.07
ACTN1-220ENST00000556433 GNLYP22749 145 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 UQCRFS1P47985 274 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 BASP1P80723 227 aaKnown RBP21.73■■□□□ 1.07
ACTN1-220ENST00000556433 JMJD6Q6NYC1 403 aaPredicted RBP21.73■■□□□ 1.07
ACTN1-220ENST00000556433 TTC23LQ6PF05 361 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 DRICH1Q6PGQ1 229 aaPredicted RBP21.73■■□□□ 1.07
ACTN1-220ENST00000556433 OR2Y1Q8NGV0 311 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 OR2L8Q8NGY9 312 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 PTERQ96BW5 349 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 FER1L6-AS2Q96M78 137 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 PANX3Q96QZ0 392 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 SMAD5Q99717 465 aaKnown RBP21.73■■□□□ 1.07
ACTN1-220ENST00000556433 IL22Q9GZX6 179 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 P2RY12Q9H244 342 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 SLAMF7Q9NQ25 335 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 TREX1Q9NSU2 369 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 BFARQ9NZS9 450 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 LUZP4Q9P127 313 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 GNPTGQ9UJJ9 305 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 MAST4O15021 2626 aa21.73■■□□□ 1.07
ACTN1-220ENST00000556433 COL12A1Q99715 3063 aa21.72■■□□□ 1.07
ACTN1-220ENST00000556433 AP3B1O00203 1094 aa21.72■■□□□ 1.07
ACTN1-220ENST00000556433 S1PR4O95977 384 aa21.72■■□□□ 1.07
ACTN1-220ENST00000556433 NMBRP28336 390 aa21.72■■□□□ 1.07
ACTN1-220ENST00000556433 SF1Q15637 639 aaKnown RBP21.72■■□□□ 1.07
ACTN1-220ENST00000556433 MRPL14Q6P1L8 145 aaKnown RBP21.72■■□□□ 1.07
ACTN1-220ENST00000556433 RBMXL3Q8N7X1 1067 aaKnown RBP21.72■■□□□ 1.07
ACTN1-220ENST00000556433 SKA2Q8WVK7 121 aaPredicted RBP21.72■■□□□ 1.07
ACTN1-220ENST00000556433 LZTFL1Q9NQ48 299 aa21.72■■□□□ 1.07
ACTN1-220ENST00000556433 INTS7Q9NVH2 962 aaKnown RBP21.72■■□□□ 1.07
ACTN1-220ENST00000556433 RASGRF2O14827 1237 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 CNOT3O75175 753 aaKnown RBP21.71■■□□□ 1.07
ACTN1-220ENST00000556433 IGHEP01854 428 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 FGGP02679 453 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 GRIA3P42263 894 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 KCNJ1P48048 391 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 ARSFP54793 590 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 FOXL2P58012 376 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 INPP5JQ15735 1006 aaPredicted RBP21.71■■□□□ 1.07
ACTN1-220ENST00000556433 ZC3H12BQ5HYM0 836 aaKnown RBP21.71■■□□□ 1.07
ACTN1-220ENST00000556433 FCRL6Q6DN72 434 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 FIGLAQ6QHK4 219 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 TTLL10Q6ZVT0 673 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 LRRC6Q86X45 466 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 MPP5Q8N3R9 675 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 OTUD6BQ8N6M0 293 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 MAIP1Q8WWC4 291 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 DLG3Q92796 817 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 RAD51AP1Q96B01 352 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 P4HTMQ9NXG6 502 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 C5AR2Q9P296 337 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 TTC7AQ9ULT0 858 aaPredicted RBP21.71■■□□□ 1.07
ACTN1-220ENST00000556433 ZKSCAN5Q9Y2L8 839 aa21.71■■□□□ 1.07
ACTN1-220ENST00000556433 FER1L5A0AVI2 2057 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 SNRNP200O75643 2136 aaKnown RBP21.7■■□□□ 1.06
ACTN1-220ENST00000556433 KPNA5O15131 536 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 RPS3P23396 243 aaKnown RBP eCLIP21.7■■□□□ 1.063e-6■□□□□ 10.6
ACTN1-220ENST00000556433 MGAT1P26572 445 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 DCAF10Q5QP82 559 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 VWA5B1Q5TIE3 1220 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 SLC6A19Q695T7 634 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 CES3Q6UWW8 571 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 OTOAQ7RTW8 1153 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 Q8NA96 180 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 CLEC1AQ8NC01 280 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 DENND1AQ8TEH3 1009 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 SLC22A11Q9NSA0 550 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 CCDC88CQ9P219 2028 aa21.7■■□□□ 1.06
ACTN1-220ENST00000556433 PCSK5Q92824 1860 aa21.69■■□□□ 1.06
ACTN1-220ENST00000556433 BLACEA4D250 179 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms