RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CORO1CQ9ULV4 474 aaPredicted RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 PLAGL1Q9UM63 463 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 PTPRQQ9UMZ3 2332 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 RUVBL2Q9Y230 463 aaKnown RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 VWA7Q9Y334 891 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 PCDHGA3Q9Y5H0 932 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 CFAP47Q6ZTR5 3102 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 TLCD2A6NGC4 264 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 EFCAB7A8K855 629 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 ARHGEF33A8MVX0 844 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 E5RI56 91 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 EIF3FO00303 357 aaPredicted RBP9.34□□□□□ -0.91
SRP54-210ENST00000556380 MATN2O00339 956 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 PRICKLE3O43900 615 aaPredicted RBP9.34□□□□□ -0.91
SRP54-210ENST00000556380 TSPAN12O95859 305 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 RPN2P04844 631 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 CHRM5P08912 532 aaPredicted RBP9.34□□□□□ -0.91
SRP54-210ENST00000556380 MPC1LP0DKB6 136 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 CBSLP0DN79 551 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 ENO3P13929 434 aaPredicted RBP9.34□□□□□ -0.91
SRP54-210ENST00000556380 FDXRP22570 491 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 PRDX3P30048 256 aaKnown RBP9.34□□□□□ -0.91
SRP54-210ENST00000556380 PEBP1P30086 187 aaKnown RBP9.34□□□□□ -0.91
SRP54-210ENST00000556380 PKLRP30613 574 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 SHMT2P34897 504 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 CBSP35520 551 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 RAB28P51157 221 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 PGGT1BP53609 377 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 CUL1Q13616 776 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 KLHL38Q2WGJ6 581 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 TTLL9Q3SXZ7 439 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.34□□□□□ -0.91
SRP54-210ENST00000556380 UBAP2Q5T6F2 1119 aaKnown RBP9.34□□□□□ -0.91
SRP54-210ENST00000556380 HECTD2Q5U5R9 776 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 CACHD1Q5VU97 1274 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 FBXO38Q6PIJ6 1188 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 FOXR1Q6PIV2 292 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 PAQR3Q6TCH7 311 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 CCDC25Q86WR0 208 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 CPNE9Q8IYJ1 553 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 FBXO15Q8NCQ5 510 aaPredicted RBP9.34□□□□□ -0.91
SRP54-210ENST00000556380 HMGCLL1Q8TB92 370 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 IFT81Q8WYA0 676 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 UBXN4Q92575 508 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 DLG3Q92796 817 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 RAD51AP1Q96B01 352 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 OR2A14Q96R47 310 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 TAAR9Q96RI9 348 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 FUT8Q9BYC5 575 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 PITPNM3Q9BZ71 974 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 RHOJQ9H4E5 214 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 FBXO8Q9NRD0 319 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 C1GALT1Q9NS00 363 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 THSD1Q9NS62 852 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 TAS2R13Q9NYV9 303 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 ACTR10Q9NZ32 417 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 AKAP7Q9P0M2 348 aaPredicted RBP9.34□□□□□ -0.91
SRP54-210ENST00000556380 ZFATQ9P243 1243 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 ZMIZ1Q9ULJ6 1067 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 RAXQ9Y2V3 346 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 TDRKHQ9Y2W6 561 aaKnown RBP9.34□□□□□ -0.91
SRP54-210ENST00000556380 NBEAQ8NFP9 2946 aa9.34□□□□□ -0.91
SRP54-210ENST00000556380 MGAQ8IWI9 3026 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 KRT87PA6NCN2 255 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 SRRM3A6NNA2 597 aaPredicted RBP9.33□□□□□ -0.92
SRP54-210ENST00000556380 MYO1CO00159 1063 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 RASGRF2O14827 1237 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 VPS26AO75436 327 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 SPAG6O75602 509 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 WISP3O95389 354 aaPredicted RBP9.33□□□□□ -0.92
SRP54-210ENST00000556380 JMJD7P0C870 316 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 ERGP11308 486 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 FOLR1P15328 257 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 MCM3P25205 808 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 SLC5A2P31639 672 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 CCNFP41002 786 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 EIF2S3P41091 472 aaKnown RBP9.33□□□□□ -0.92
SRP54-210ENST00000556380 BDKRB1P46663 353 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 PPM1FP49593 454 aaPredicted RBP9.33□□□□□ -0.92
SRP54-210ENST00000556380 MAPK10P53779 464 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 TAS2R39P59534 338 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 PRKAA1Q13131 559 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 CYP2A13Q16696 494 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 KBTBD12Q3ZCT8 623 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 DNTTIP2Q5QJE6 756 aaKnown RBP9.33□□□□□ -0.92
SRP54-210ENST00000556380 FAM45BPQ6NSW5 357 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 UGT3A1Q6NUS8 523 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 ARMC6Q6NXE6 501 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 TMEM207Q6UWW9 146 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 CAPN12Q6ZSI9 719 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 PIWIL4Q7Z3Z4 852 aaKnown RBP9.33□□□□□ -0.92
SRP54-210ENST00000556380 KMT5CQ86Y97 462 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 IFT20Q8IY31 132 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 D2HGDHQ8N465 521 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 LMNTD1Q8N9Z9 388 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 OR2L8Q8NGY9 312 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 FAM45AQ8TCE6 357 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 FBF1Q8TES7 1133 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 EEF1AKMT1Q8WVE0 214 aa9.33□□□□□ -0.92
SRP54-210ENST00000556380 PDLIM5Q96HC4 596 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms