RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 EURLQ9NYK6 297 aa7.5□□□□□ -1.21
PTCSC3-201ENST00000556013 IFT80Q9P2H3 777 aaPredicted RBP7.5□□□□□ -1.21
PTCSC3-201ENST00000556013 NDOR1Q9UHB4 597 aa7.5□□□□□ -1.21
PTCSC3-201ENST00000556013 CDYLQ9Y232 598 aa7.5□□□□□ -1.21
PTCSC3-201ENST00000556013 R3HDM2Q9Y2K5 976 aaKnown RBP7.5□□□□□ -1.21
PTCSC3-201ENST00000556013 TCAF1Q9Y4C2 921 aa7.5□□□□□ -1.21
PTCSC3-201ENST00000556013 MAST4O15021 2626 aa7.5□□□□□ -1.21
PTCSC3-201ENST00000556013 LRRK2Q5S007 2527 aa7.5□□□□□ -1.21
PTCSC3-201ENST00000556013 SPENQ96T58 3664 aaKnown RBP7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 TCRBV7S2A1N4TA0A589 114 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 FITM1A5D6W6 292 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 CYSRT1A8MQ03 144 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 H3BMM5 538 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 AGPSO00116 658 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 PFDN6O15212 129 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 ZNF185O15231 689 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 PRICKLE3O43900 615 aaPredicted RBP7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 OR1I1O60431 355 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 FTCDO95954 541 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 IFNB1P01574 187 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 PRSS56P0CW18 603 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 PVRP15151 417 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 MMP11P24347 488 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 AOAHP28039 575 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 PKLRP30613 574 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 CCR7P32248 378 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 CCNFP41002 786 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 FOLR3P41439 243 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 EMP3P54852 163 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 RELAQ04206 551 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 HSPA14Q0VDF9 509 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 GRB7Q14451 532 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 GRM7Q14831 915 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 RPS6KA1Q15418 735 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 PTCHD3Q3KNS1 767 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 SYTL3Q4VX76 610 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 CPZQ66K79 652 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 OVCH1Q7RTY7 1134 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 MCATQ8IVS2 390 aaKnown RBP7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 GALNT16Q8N428 558 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 RAB42Q8N4Z0 105 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 CCDC89Q8N998 374 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 LMNTD1Q8N9Z9 388 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 Q8NA96 180 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 PPHLN1Q8NEY8 458 aaKnown RBP7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 RNF31Q96EP0 1072 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 BARD1Q99728 777 aaKnown RBP7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 NUDT9Q9BW91 350 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 MRM3Q9HC36 420 aaKnown RBP7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 RAB6BQ9NRW1 208 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 HOMER3Q9NSC5 361 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 BFARQ9NZS9 450 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 NXT1Q9UKK6 140 aaKnown RBP7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 SLC39A10Q9ULF5 831 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 PACSIN2Q9UNF0 486 aaPredicted RBP7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 TDRKHQ9Y2W6 561 aaKnown RBP7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 PTRH2Q9Y3E5 179 aaKnown RBP7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 FLNCQ14315 2725 aa7.49□□□□□ -1.21
PTCSC3-201ENST00000556013 NBPF19A0A087WUL8 3843 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 MAGEB16A2A368 324 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 WIPF3A6NGB9 483 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 OR51F1A6NGY5 319 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 GOLGA6L6A8MZA4 724 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 RASGRF2O14827 1237 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 PCDH17O14917 1159 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 CD3EAPO15446 510 aaKnown RBP7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 PHF2O75151 1096 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 APRTP07741 180 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 ITGAXP20702 1163 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 PEBP1P30086 187 aaKnown RBP7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 HSD17B2P37059 387 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 GRIA1P42261 906 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 SARNPP82979 210 aaKnown RBP7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 CHAF1BQ13112 559 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 AIMP2Q13155 320 aaKnown RBP7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 ATP1A4Q13733 1029 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 BRD3Q15059 726 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 TMED2Q15363 201 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 SF1Q15637 639 aaKnown RBP7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 CCDC38Q502W7 563 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 CRB2Q5IJ48 1285 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 MEI1Q5TIA1 1274 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 SLC6A19Q695T7 634 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 PRMT9Q6P2P2 845 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 FIGLAQ6QHK4 219 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 IGFL2Q6UWQ7 119 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 Q6ZS92 163 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 MRGPREQ86SM8 312 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 SDCCAG8Q86SQ7 713 aaPredicted RBP7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 IQCKQ8N0W5 287 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 ZADH2Q8N4Q0 377 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 ZNF655Q8N720 491 aaPredicted RBP7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 LINC01555Q8NAE3 123 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 GSDMBQ8TAX9 411 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 SSC4DQ8WTU2 575 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 ZNF778Q96MU6 729 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 FOPNLQ96NB1 174 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 KIFC1Q9BW19 673 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 P2RY12Q9H244 342 aa7.48□□□□□ -1.21
PTCSC3-201ENST00000556013 CHRAC1Q9NRG0 131 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms