RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 GRIP1Q9Y3R0 1128 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 PCDH11YQ9BZA8 1340 aa2.91□□□□□ -1.94
SCFD1-213ENST00000554776 A0A1W2PPK0 400 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 MED19A0JLT2 244 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 HTR3EA5X5Y0 456 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 E9PI62 339 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 C16orf97H3BN30 126 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 DVL1O14640 695 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 CAPN9O14815 690 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 LINC01565O15544 149 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 ST8SIA3O43173 380 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 LMX1BO60663 402 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 IGHV2-70P01814 119 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 SP1P08047 785 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 SUPT20HL2P0C7V6 817 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 CETPP11597 493 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 ADRA2CP18825 462 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 GNAZP19086 355 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 EEF1B2P24534 225 aaKnown RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 ACAT1P24752 427 aaKnown RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 PSMB4P28070 264 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 FMO5P49326 533 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 ASCL1P50553 236 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 LIMK1P53667 647 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 CDH11P55287 796 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 TUBB4BP68371 445 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 CX3CL1P78423 397 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 SCN1BQ07699 218 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 PPP2R5CQ13362 524 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 RBBP5Q15291 538 aaKnown RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 ACCSLQ4AC99 568 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 MCMDC2Q4G0Z9 681 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 SIRPB2Q5JXA9 342 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 STPG1Q5TH74 334 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 SFMBT2Q5VUG0 894 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 PACS1Q6VY07 963 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 GDPD4Q6W3E5 623 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF852Q6ZMS4 543 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 C11orf57Q6ZUT1 292 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 ANO5Q75V66 913 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 CCDC91Q7Z6B0 441 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 TMEM139Q8IV31 216 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 DCUN1D3Q8IWE4 304 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 NUP93Q8N1F7 819 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 DNAJC22Q8N4W6 341 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 TMCO5AQ8N6Q1 288 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF611Q8N823 705 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 TRIML1Q8N9V2 468 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 THAP8Q8NA92 274 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 NPEPL1Q8NDH3 523 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 RDM1Q8NG50 284 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 OR11H4Q8NGC9 324 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 VANGL1Q8TAA9 524 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 GRAPLQ8TC17 118 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 ATL1Q8WXF7 558 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 IRGQQ8WZA9 623 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 MOB3AQ96BX8 217 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 BSCL2Q96G97 398 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 SPATA33Q96N06 139 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 LRRC3BQ96PB8 259 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 BTBD10Q9BSF8 475 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 MMADHCQ9H3L0 296 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 FN3KQ9H479 309 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 CDH20Q9HBT6 801 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 SEPT10Q9P0V9 454 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 ARMCX3Q9UH62 379 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 DAPK2Q9UIK4 370 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 SNX7Q9UNH6 387 aa2.9□□□□□ -1.95
SCFD1-213ENST00000554776 FAF1Q9UNN5 650 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-213ENST00000554776 A0A0U1RQG5 324 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 A0A1W2PRB8 838 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 FAM172BPA6NC97 362 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 CCDC188H7C350 402 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 P2RY10O00398 339 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 GAPDHSO14556 408 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 PSMA7O14818 248 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 CTSVO60911 334 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 MOCS3O95396 460 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 BAG4O95429 457 aaKnown RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 IGHV4-39P01824 125 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 CRYAAP02489 173 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 CSN3P07498 182 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 PLA2G4BP0C869 781 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 HAPLN1P10915 354 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 HSPA8P11142 646 aaKnown RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 ZNF23P17027 643 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 NR1D1P20393 614 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 MSH3P20585 1137 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 TCEA1P23193 301 aaKnown RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 ANOS1P23352 680 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 CD27P26842 260 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 ATP5DP30049 168 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 PTGER4P35408 488 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 WNT5AP41221 380 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 MLLT10P55197 1068 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 RPS18P62269 152 aaKnown RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 MAT1AQ00266 395 aaKnown RBP2.89□□□□□ -1.95
SCFD1-213ENST00000554776 PRKCZQ05513 592 aa2.89□□□□□ -1.95
SCFD1-213ENST00000554776 GAGE5Q13069 117 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms