RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ZNF641Q96N77 438 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 ZNF599Q96NL3 588 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 PSKH2Q96QS6 385 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 CHP1Q99653 195 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 VKORC1Q9BQB6 163 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 MGME1Q9BQP7 344 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 WRAP53Q9BUR4 548 aaKnown RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 CINPQ9BW66 212 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 CALN1Q9BXU9 219 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SLC17A9Q9BYT1 436 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 KLK15Q9H2R5 256 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 ZWILCHQ9H900 591 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 MBNL1Q9NR56 388 aaKnown RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 ABHD10Q9NUJ1 306 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 FOXJ2Q9P0K8 574 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 RCOR3Q9P2K3 495 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 UVRAGQ9P2Y5 699 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 PNMA8BQ9ULN7 279 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 LUC7L2Q9Y383 392 aaKnown RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 U3KQA8 63 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 ZZEF1O43149 2961 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 FAM208BQ5VWN6 2430 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 URB1O60287 2271 aaKnown RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SPTY2D1-AS1A0A0U1RR47 76 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 CFAP69A5D8W1 941 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 FAM149AA5PLN7 773 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 TMEM110-MUSTN1A8MSY1 372 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 MYO1FO00160 1098 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 FPGTO14772 594 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 FFAR2O15552 330 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 SOCS5O75159 536 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 PALMO75781 387 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 NEBLO76041 1014 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 MTA2O94776 668 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 IGLV2-14P01704 120 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 CSF2P04141 144 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 PCCBP05166 539 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 TPM3P06753 285 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 H2AFZP0C0S5 128 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 DGKAP23743 735 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 ACP1P24666 158 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 SERPINA4P29622 427 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 SERPINB6P35237 376 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 GJC1P36383 396 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 FOLR3P41439 243 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 MAPK10P53779 464 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 CDH6P55285 790 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 MAXP61244 160 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 AP1S1P61966 158 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 SEMG2Q02383 582 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 NSUN2Q08J23 767 aaKnown RBP eCLIP4.14□□□□□ -1.75
VTI1B-203ENST00000554636 ELP6Q0PNE2 266 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 GALNT2Q10471 571 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 TRAF2Q12933 501 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 SGCGQ13326 291 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 ILKQ13418 452 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 DYRK1AQ13627 763 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 PDE1CQ14123 709 aaPredicted RBP4.14□□□□□ -1.75
VTI1B-203ENST00000554636 KRT81Q14533 505 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 IHHQ14623 411 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 NFATC4Q14934 902 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 PAFAH1B3Q15102 231 aaKnown RBP4.14□□□□□ -1.75
VTI1B-203ENST00000554636 CNGA3Q16281 694 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 UGP2Q16851 508 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 KIF26BQ2KJY2 2108 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 CCDC157Q569K6 752 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 HES3Q5TGS1 186 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 KAZNQ674X7 775 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 KCTD16Q68DU8 428 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 BRAT1Q6PJG6 821 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 SARM1Q6SZW1 724 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 TMCO3Q6UWJ1 677 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 MACC1Q6ZN28 852 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 H2AFVQ71UI9 128 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 DPPA4Q7L190 304 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 PEG10Q86TG7 708 aaKnown RBP4.14□□□□□ -1.75
VTI1B-203ENST00000554636 PARGQ86W56 976 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 TMPRSS12Q86WS5 348 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 CAMK1DQ8IU85 385 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 RBFAQ8N0V3 343 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 PELI3Q8N2H9 469 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 GALNT15Q8N3T1 639 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 ATPAF2Q8N5M1 289 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 TEX26Q8N6G2 289 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 PQLC3Q8N755 202 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 ZNF548Q8NEK5 533 aaPredicted RBP4.14□□□□□ -1.75
VTI1B-203ENST00000554636 OR8K1Q8NGG5 319 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 CTNNBL1Q8WYA6 563 aaPredicted RBP4.14□□□□□ -1.75
VTI1B-203ENST00000554636 RFFLQ8WZ73 363 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 RAPGEF5Q92565 580 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 TBATAQ96M53 351 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 NUDCD1Q96RS6 583 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 ZNF670Q9BS34 389 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 LRRC61Q9BV99 259 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 C1QTNF7Q9BXJ2 289 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 SLC13A1Q9BZW2 595 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 TCEAL2Q9H3H9 227 aaPredicted RBP4.14□□□□□ -1.75
VTI1B-203ENST00000554636 NLGN3Q9NZ94 848 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 DKK4Q9UBT3 224 aa4.14□□□□□ -1.75
VTI1B-203ENST00000554636 ZFYVE26Q68DK2 2539 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms