RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 COL10A1Q03692 680 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 OCA2Q04671 838 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 RAD51Q06609 339 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 CETN1Q12798 172 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 NME3Q13232 169 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 NR1D2Q14995 579 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 IRF4Q15306 451 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 WSCD2Q2TBF2 565 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 TMEM52BQ4KMG9 183 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 ZCWPW2Q504Y3 356 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 PDCD4Q53EL6 469 aaKnown RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 SPECC1LQ69YQ0 1117 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 DENND1BQ6P3S1 775 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 ZDHHC24Q6UX98 284 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 GDPD4Q6W3E5 623 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 KDELC2Q7Z4H8 507 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 C17orf82Q86X59 251 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 NRSN1Q8IZ57 195 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 SLC34A3Q8N130 599 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 Q8NA96 180 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 OR4D9Q8NGE8 314 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 KIAA1524Q8TCG1 905 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 HCAR2Q8TDS4 363 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 ZNF606Q8WXB4 792 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 ART4Q93070 314 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 IQCDQ96DY2 449 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 MOCOSQ96EN8 888 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 NUDT22Q9BRQ3 303 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 ZPBPQ9BS86 351 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 SELENOOQ9BVL4 669 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 MS4A7Q9GZW8 240 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 TKTL2Q9H0I9 626 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 UPF2Q9HAU5 1272 aaKnown RBP4.83□□□□□ -1.64
ATXN3-228ENST00000554592 CASS4Q9NQ75 786 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 OCIAD1Q9NX40 245 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 DONSONQ9NYP3 566 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 RRN3Q9NYV6 651 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 MPP6Q9NZW5 540 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 CTTNBP2NLQ9P2B4 639 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 DKK3Q9UBP4 350 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 ITM2BQ9Y287 266 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 NBPF19A0A087WUL8 3843 aa4.83□□□□□ -1.64
ATXN3-228ENST00000554592 IGLV3-10A0A075B6K4 115 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 TMEM200CA6NKL6 621 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 B4DGG1 531 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 DIRC3C9JPN6 131 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 CACNB4O00305 520 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 INPP4BO15327 924 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 SLC16A3O15427 465 aaKnown RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 THAP12O43422 761 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 SRGAP2O75044 1071 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 GRAP2O75791 330 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 CD160O95971 181 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 F9P00740 461 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 CALCAP01258 141 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 FGF1P05230 155 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 ELANEP08246 267 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 RNF224P0DH78 156 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 CHRM3P20309 590 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 NR1D1P20393 614 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 GKP32189 559 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 STAT1P42224 750 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 HSPA7P48741 367 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 CARSP49589 748 aaKnown RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 FKBP3Q00688 224 aaKnown RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 MC2RQ01718 297 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 GCNT1Q02742 428 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 GNA12Q03113 381 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 PIGFQ07326 219 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 ZNF844Q08AG5 666 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 ELP6Q0PNE2 266 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 PDCLQ13371 301 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 PEX6Q13608 980 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 KRT72Q14CN4 511 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 MPEG1Q2M385 716 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 EIF2S3LQ2VIR3 472 aaKnown RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 BRMS1LQ5PSV4 323 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 NKAIN2Q5VXU1 208 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 ATL3Q6DD88 541 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 TMEM71Q6P5X7 295 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 CEACAM20Q6UY09 585 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 C11orf57Q6ZUT1 292 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 RNF44Q7L0R7 432 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 RRAGAQ7L523 313 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 TIPARPQ7Z3E1 657 aaKnown RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 GDF7Q7Z4P5 450 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 TFAP2DQ7Z6R9 452 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 SFTPA2Q8IWL1 248 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 ZNF683Q8IZ20 524 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 ESX1Q8N693 406 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 PSD4Q8NDX1 1056 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 OR2AP1Q8NGE2 309 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 OR56A4Q8NGH8 313 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 OR6K2Q8NGY2 324 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 POC1BQ8TC44 478 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 OR1E3Q8WZA6 343 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 STARD8Q92502 1023 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 ARHGEF2Q92974 986 aaKnown RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 SLC35C1Q96A29 364 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 SPSB4Q96A44 273 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms