RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 KRT222Q8N1A0 295 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 OTUD6BQ8N6M0 293 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 OR1L3Q8NH93 324 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 GSDMBQ8TAX9 411 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 COG1Q8WTW3 980 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 SLCO2A1Q92959 643 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 SLC22A18Q96BI1 424 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 BIRC8Q96P09 236 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 SERPINB12Q96P63 405 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 NRTNQ99748 197 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 MENTQ9BUN1 341 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 ACTL8Q9H568 366 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 SPHK1Q9NYA1 384 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 MRPS18BQ9Y676 258 aaKnown RBP10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 ANKRD12Q6UB98 2062 aa10.05□□□□□ -0.8
PTCD2P1-201ENST00000554393 E7EQ34 232 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 H3BMH7 237 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 MEN1O00255 615 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 AVILO75366 819 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 S1PR4O95977 384 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 RAB40ALP0C0E4 278 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 PVRP15151 417 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 CD9P21926 228 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 PEBP1P30086 187 aaKnown RBP10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 CCNFP41002 786 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 GABRA4P48169 554 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 CSE1LP55060 971 aaKnown RBP10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 EIF3BP55884 814 aaKnown RBP10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 GRB7Q14451 532 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 GBX1Q14549 363 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 UGT8Q16880 541 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 DEFB109BQ30KR1 87 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 ANKRD20A4Q4UJ75 823 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 CTSL3PQ5NE16 218 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 NEPROQ6NW34 567 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 CES3Q6UWW8 571 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 CDHR3Q6ZTQ4 885 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 RETREG3Q86VR2 466 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 PPIL6Q8IXY8 311 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 GPR135Q8IZ08 494 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 RAB42Q8N4Z0 105 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 NAT8LQ8N9F0 302 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 LINC01555Q8NAE3 123 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 SLC38A9Q8NBW4 561 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 OR2L8Q8NGY9 312 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 HMGCLL1Q8TB92 370 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 MAGEC3Q8TD91 643 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 THAP4Q8WY91 577 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 ANP32BQ92688 251 aaKnown RBP10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 MR1Q95460 341 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 RAD51AP1Q96B01 352 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 CLIP3Q96DZ5 547 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 PDLIM2Q96JY6 352 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 USB1Q9BQ65 265 aaKnown RBP10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 C17orf62Q9BQA9 187 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 ACTR5Q9H9F9 607 aaPredicted RBP10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 PCMTD2Q9NV79 361 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 KLHL42Q9P2K6 505 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 HEMK1Q9Y5R4 338 aaPredicted RBP10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 KCNMB2Q9Y691 235 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 AP1M2Q9Y6Q5 423 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 PTPN13Q12923 2485 aa10.04□□□□□ -0.8
PTCD2P1-201ENST00000554393 HEATR5BQ9P2D3 2071 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 ZCWPW2A0A1B0GU75 182 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 ISM1B1AKI9 464 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 GOLGA8KD6RF30 607 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 GOLGA8TH3BQL2 631 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 RASGRF2O14827 1237 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 USP1O94782 785 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 C1orf105O95561 183 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 PKMP14618 531 aaKnown RBP10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 PMS2P54278 862 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 DHX34Q14147 1143 aaKnown RBP10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 ERV3-1Q14264 604 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 PPP1R7Q15435 360 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 ZIC1Q15915 447 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 MSS51Q4VC12 460 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 RNASEH2BQ5TBB1 312 aaKnown RBP10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 ATP1A1-AS1Q5TC04 95 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 NUP210LQ5VU65 1888 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 FAM199XQ6PEV8 388 aaPredicted RBP10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 CENPUQ71F23 418 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 TRIM73Q86UV7 250 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 APLFQ8IW19 511 aaPredicted RBP10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 SYTL1Q8IYJ3 562 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 CFAP61Q8NHU2 1237 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 C9orf43Q8TAL5 461 aaPredicted RBP10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 CALML6Q8TD86 181 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 N4BP2L2Q92802 583 aaPredicted RBP10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 ZNF669Q96BR6 464 aaPredicted RBP10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 RNF31Q96EP0 1072 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 FOPNLQ96NB1 174 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 NLNQ9BYT8 704 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 CHST8Q9H2A9 424 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 AKIRIN1Q9H9L7 192 aaPredicted RBP10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 FAM60AQ9NP50 221 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 ENAMQ9NRM1 1142 aa10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 INTS7Q9NVH2 962 aaKnown RBP10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 TRMT1Q9NXH9 659 aaKnown RBP10.03□□□□□ -0.8
PTCD2P1-201ENST00000554393 SPATA7Q9P0W8 599 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms