RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 CSH1P0DML2 217 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 CSH2P0DML3 217 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 TRIM21P19474 475 aaKnown RBP5.81□□□□□ -1.48
PCNX1-205ENST00000553508 EFNA1P20827 205 aaPredicted RBP5.81□□□□□ -1.48
PCNX1-205ENST00000553508 KRTAP10-12P60413 245 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 CDK3Q00526 305 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 WTAPQ15007 396 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 TAF13Q15543 124 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 DHRS7BQ6IAN0 325 aaPredicted RBP5.81□□□□□ -1.48
PCNX1-205ENST00000553508 TEX38Q6PEX7 206 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 LINGO4Q6UY18 593 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 CEP57Q86XR8 500 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 TAGAPQ8N103 731 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 PPFIBP2Q8ND30 876 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 MCUQ8NE86 351 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 LINC00479Q96M42 142 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 NEK1Q96PY6 1258 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 OPRPNQ99935 248 aaPredicted RBP5.81□□□□□ -1.48
PCNX1-205ENST00000553508 LAT2Q9GZY6 243 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 ARRDC1-AS1Q9H2J1 176 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 TBC1D22BQ9NU19 505 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 PLCXD1Q9NUJ7 323 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 KLHL8Q9P2G9 620 aaPredicted RBP5.81□□□□□ -1.48
PCNX1-205ENST00000553508 CEP152O94986 1710 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 UBR1Q8IWV7 1749 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 PTPN23Q9H3S7 1636 aa5.81□□□□□ -1.48
PCNX1-205ENST00000553508 SLIT1O75093 1534 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 LRRC7Q96NW7 1537 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 KDM5AP29375 1690 aaKnown RBP5.8□□□□□ -1.48
PCNX1-205ENST00000553508 A0A087WW49 117 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 TSPAN9O75954 239 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 MATR3P43243 847 aaKnown RBP eCLIP5.8□□□□□ -1.48
PCNX1-205ENST00000553508 LUMP51884 338 aaPredicted RBP5.8□□□□□ -1.48
PCNX1-205ENST00000553508 PDX1P52945 283 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 HNRNPDQ14103 355 aaKnown RBP5.8□□□□□ -1.48
PCNX1-205ENST00000553508 PHLDA2Q53GA4 152 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 Q6ZSR9 355 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 RPAP2Q8IXW5 612 aaPredicted RBP5.8□□□□□ -1.48
PCNX1-205ENST00000553508 SCML4Q8N228 414 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 MAPKAPK5-AS1Q8N8E1 139 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 TRIML1Q8N9V2 468 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 OR4C3Q8NH37 302 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 FGFBP3Q8TAT2 258 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 HPSE2Q8WWQ2 592 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 SUSD6Q92537 303 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 LMF2Q9BU23 707 aaKnown RBP5.8□□□□□ -1.48
PCNX1-205ENST00000553508 PSD3Q9NYI0 1048 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 FLRT3Q9NZU0 649 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 TUBE1Q9UJT0 475 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 MTUS1Q9ULD2 1270 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 DAPK1P53355 1430 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 FGD6Q6ZV73 1430 aa5.8□□□□□ -1.48
PCNX1-205ENST00000553508 EFCAB6Q5THR3 1501 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 ARHGAP23Q9P227 1491 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 A8MV72 311 aaPredicted RBP5.79□□□□□ -1.48
PCNX1-205ENST00000553508 ARHGEF9O43307 516 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 MED24O75448 989 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 AP2A2O94973 939 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 FAM157CP0CG43 387 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 SAT1P21673 171 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 CA4P22748 312 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 SLC6A12P48065 614 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 B3GALT5-AS1P59052 145 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 PPARDQ03181 441 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 TMPRSS11FQ6ZWK6 438 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 MYPOPQ86VE0 399 aaPredicted RBP5.79□□□□□ -1.48
PCNX1-205ENST00000553508 TMEM139Q8IV31 216 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 CEP57L1Q8IYX8 460 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 ARHGAP24Q8N264 748 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 ZNF611Q8N823 705 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 PAPD5Q8NDF8 572 aaKnown RBP5.79□□□□□ -1.48
PCNX1-205ENST00000553508 OR2T11Q8NH01 316 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 MOSPD2Q8NHP6 518 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 TAF15Q92804 592 aaKnown RBP eCLIP5.79□□□□□ -1.48
PCNX1-205ENST00000553508 MAGED4Q96JG8 741 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 OLFM1Q99784 485 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 TMEM181Q9P2C4 612 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 ZDHHC2Q9UIJ5 367 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 PCDHGB4Q9UN71 923 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 ABCC5O15440 1437 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 TMEM2Q9UHN6 1383 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 LMTK2Q8IWU2 1503 aa5.79□□□□□ -1.48
PCNX1-205ENST00000553508 ANKUB1A6NFN9 424 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 ERI2A8K979 691 aaKnown RBP5.78□□□□□ -1.48
PCNX1-205ENST00000553508 ALOX12P18054 663 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 DNASE1P24855 282 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 CLNS1AP54105 237 aaKnown RBP5.78□□□□□ -1.48
PCNX1-205ENST00000553508 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 PRKCZQ05513 592 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 NR1D2Q14995 579 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 KRT79Q5XKE5 535 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.78□□□□□ -1.48
PCNX1-205ENST00000553508 PIGZQ86VD9 579 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 TMEM173Q86WV6 379 aaPredicted RBP5.78□□□□□ -1.48
PCNX1-205ENST00000553508 LINC00346Q8IVM7 164 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 CDK20Q8IZL9 346 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 IRGQQ8WZA9 623 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 POM121L2Q96KW2 1035 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 BTBD10Q9BSF8 475 aa5.78□□□□□ -1.48
PCNX1-205ENST00000553508 NUP85Q9BW27 656 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms