RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 TRIM58Q8NG06 486 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 OR13C4Q8NGS5 318 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 ACTL9Q8TC94 416 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 PROKR1Q8TCW9 393 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 ELMO1Q92556 727 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 DLG3Q92796 817 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 CALR3Q96L12 384 aaKnown RBP8.41□□□□□ -1.06
TMEM116-217ENST00000552801 TRAPPC9Q96Q05 1148 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 XKR8Q9H6D3 395 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 MLXIPLQ9NP71 852 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 IGSF5Q9NSI5 407 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 INTS7Q9NVH2 962 aaKnown RBP8.41□□□□□ -1.06
TMEM116-217ENST00000552801 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.41□□□□□ -1.06
TMEM116-217ENST00000552801 B3GNT3Q9Y2A9 372 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 COPG1Q9Y678 874 aaKnown RBP8.41□□□□□ -1.06
TMEM116-217ENST00000552801 COL12A1Q99715 3063 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 RP1L1Q8IWN7 2480 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 ANKUB1A6NFN9 424 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 BTN3A3O00478 584 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 GAPDHSO14556 408 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 LIN7AO14910 233 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 ZSCAN9O15535 394 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 PSMD3O43242 534 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 SEMA7AO75326 666 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 CEACAM4O75871 244 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 AP2A2O94973 939 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 OR56A5P0C7T3 313 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 MSL3P1P0C860 447 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 ITGAXP20702 1163 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 ITGA3P26006 1051 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 ACRV1P26436 265 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 RORAP35398 523 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 NSG1P42857 185 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 PLOD1Q02809 727 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 CACNG1Q06432 222 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 LAMB3Q13751 1172 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 BOP1Q14137 746 aaKnown RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 TCEAL1Q15170 157 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 TAZQ16635 292 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 DEFB110Q30KQ9 67 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 P3H1Q32P28 736 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 PRR30Q53SZ7 412 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 FAM69BQ5VUD6 431 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 HIST2H2BCQ6DN03 193 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 LCN10Q6JVE6 187 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 C11orf63Q6NUN7 778 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 TTC23LQ6PF05 361 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 FAM198BQ6UWH4 519 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 RANBP10Q6VN20 620 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 ZNF517Q6ZMY9 492 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 MAMDC2Q7Z304 686 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 MRGPREQ86SM8 312 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 KIAA1328Q86T90 577 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 SERPINA9Q86WD7 417 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 GALNT16Q8N428 558 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 MMGT1Q8N4V1 131 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 RAB42Q8N4Z0 105 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 CISD2Q8N5K1 135 aaKnown RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 LILRA3Q8N6C8 439 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 ZNF655Q8N720 491 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 CCDC110Q8TBZ0 833 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 ADAMTS17Q8TE56 1095 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 PTERQ96BW5 349 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 SPATA13Q96N96 652 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 GBP5Q96PP8 586 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 SMAD5Q99717 465 aaKnown RBP8.4□□□□□ -1.06
TMEM116-217ENST00000552801 PITPNM3Q9BZ71 974 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 LACRTQ9GZZ8 138 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 GOLPH3Q9H4A6 298 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 C10orf88Q9H8K7 445 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 LRRC40Q9H9A6 602 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 GUCA1BQ9UMX6 200 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 SNX12Q9UMY4 172 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 SLC5A6Q9Y289 635 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 JRKLQ9Y4A0 524 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 PCDHA13Q9Y5I0 950 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 PIKFYVEQ9Y2I7 2098 aa8.4□□□□□ -1.06
TMEM116-217ENST00000552801 BSNQ9UPA5 3926 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 MED13Q9UHV7 2174 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 A0A0J9YY10 115 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 CCL22O00626 93 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 UGT2B7P16662 529 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 CA5AP35218 305 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 ZNF140P52738 457 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-217ENST00000552801 ARSFP54793 590 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 HADHBP55084 474 aaKnown RBP8.39□□□□□ -1.07
TMEM116-217ENST00000552801 RWDD2BP57060 319 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 KIF5AQ12840 1032 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 SPARCL1Q14515 664 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 POU6F1Q14863 301 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 MYBPC3Q14896 1274 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 SLC9A5Q14940 896 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 DCAF10Q5QP82 559 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 CDHR3Q6ZTQ4 885 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 TRIM73Q86UV7 250 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 TBC1D21Q8IYX1 336 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 RBMXL3Q8N7X1 1067 aaKnown RBP8.39□□□□□ -1.07
TMEM116-217ENST00000552801 DNAAF3Q8N9W5 541 aa8.39□□□□□ -1.07
TMEM116-217ENST00000552801 COG1Q8WTW3 980 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms