RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 PSIP1O75475 530 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 SPAG6O75602 509 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 STK17BO94768 372 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 PVRP15151 417 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 FOLR1P15328 257 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 ST6GAL1P15907 406 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 STX2P32856 288 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 CDKN2DP55273 166 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 TUBB4BP68371 445 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 GRB7Q14451 532 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 SLC5A12Q1EHB4 618 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 MANEAQ5SRI9 462 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 PIWIL4Q7Z3Z4 852 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 BPHLQ86WA6 291 aaPredicted RBP17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 CTAGE3PQ8IX95 158 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 C2orf73Q8N5S3 287 aaPredicted RBP17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 IL22RA1Q8N6P7 574 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 OR9A1PQ8NGU1 263 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 IFT81Q8WYA0 676 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 N4BP2L2Q92802 583 aaPredicted RBP17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 TRAPPC9Q96Q05 1148 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 OR2A14Q96R47 310 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 ULBP3Q9BZM4 244 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 TSPYL1Q9H0U9 437 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 DMGDHQ9UI17 866 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 VWA7Q9Y334 891 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 PSAT1Q9Y617 370 aa17.86■□□□□ 0.45
PRPF40B-216ENST00000552301 FAM95CA0A1B0GW59 222 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 TCRBV9S1A1TA0A576 114 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 ZNF839A8K0R7 811 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 ZBTB14O43829 449 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 RAD1O60671 282 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 SYF2O95926 243 aaKnown RBP17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 FGF5P12034 268 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 SAT1P21673 171 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 SLC12A2P55011 1212 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 TMPRSS3P57727 454 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 ADAMTS20P59510 1910 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 TGIF1Q15583 401 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 GPR19Q15760 415 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 CCSMST1Q4G0I0 132 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 FREM2Q5SZK8 3169 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 PAQR3Q6TCH7 311 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 ZC3HC1Q86WB0 502 aaKnown RBP17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 C19orf47Q8N9M1 422 aaKnown RBP17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 LINC01555Q8NAE3 123 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 LINGO1Q96FE5 620 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 VPS39Q96JC1 886 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 MENTQ9BUN1 341 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 RHOJQ9H4E5 214 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 SYTL2Q9HCH5 934 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 ZDHHC18Q9NUE0 388 aa17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 INTS7Q9NVH2 962 aaKnown RBP17.85■□□□□ 0.45
PRPF40B-216ENST00000552301 MYO1CO00159 1063 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 CYP2A7P20853 494 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 FDXRP22570 491 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 OAS2P29728 719 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 PEBP1P30086 187 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 HSD17B2P37059 387 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 IL2P60568 153 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 TSTA3Q13630 321 aaPredicted RBP17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 SF1Q15637 639 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 COL28A1Q2UY09 1125 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 UBE2R2Q712K3 238 aaPredicted RBP17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 CACNA2D3Q8IZS8 1091 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 NLGN4XQ8N0W4 816 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 NLGN4YQ8NFZ3 816 aaPredicted RBP17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 OR8K5Q8NH50 307 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 ASB11Q8WXH4 323 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 CCNL2Q96S94 520 aaPredicted RBP17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 FMO2Q99518 471 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 CPNE1Q99829 537 aa17.84■□□□□ 0.45
PRPF40B-216ENST00000552301 PTPRQQ9UMZ3 2332 aa17.83■□□□□ 0.45
PRPF40B-216ENST00000552301 KRT87PA6NCN2 255 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 TMEM150CB9EJG8 249 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 KIAA0754O94854 1291 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 FKBP9O95302 570 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 C8GP07360 202 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 PHBP35232 272 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 GPX6P59796 221 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 SP140Q13342 867 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 ARHGAP19Q14CB8 494 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 CYS1Q717R9 158 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 DTX1Q86Y01 620 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 TMEM126BQ8IUX1 230 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 ESX1Q8N693 406 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 LMNTD1Q8N9Z9 388 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 FBXO15Q8NCQ5 510 aaPredicted RBP17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 HMGCLL1Q8TB92 370 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 MCOLN3Q8TDD5 553 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 EEF1AKMT1Q8WVE0 214 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 SMPDL3AQ92484 453 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 KIAA1143Q96AT1 154 aaPredicted RBP17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 TCTN2Q96GX1 697 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 FCRL4Q96PJ5 515 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 OLFM1Q99784 485 aa17.83■□□□□ 0.44
PRPF40B-216ENST00000552301 LRRC4CQ9HCJ2 640 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms