RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 MLNP12872 115 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 ITGAXP20702 1163 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 OGNP20774 298 aaKnown RBP12.55□□□□□ -0.4
NPAS3-209ENST00000551008 MAGP20916 626 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 CD9P21926 228 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 FMO4P31512 558 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 CBSP35520 551 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 PMS2P54278 862 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 ADARP55265 1226 aaKnown RBP12.55□□□□□ -0.4
NPAS3-209ENST00000551008 FOXL2P58012 376 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 YBX1P67809 324 aaKnown RBP12.55□□□□□ -0.4
NPAS3-209ENST00000551008 KIR2DS3Q14952 304 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 ANKRD20A4Q4UJ75 823 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 COLEC12Q5KU26 742 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 FCRL6Q6DN72 434 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 PTRHD1Q6GMV3 140 aaKnown RBP12.55□□□□□ -0.4
NPAS3-209ENST00000551008 ZNF549Q6P9A3 640 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 SYVN1Q86TM6 617 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 TAX1BP1Q86VP1 789 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 LRRC6Q86X45 466 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 CILP2Q8IUL8 1156 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 APLFQ8IW19 511 aaPredicted RBP12.55□□□□□ -0.4
NPAS3-209ENST00000551008 DENND6AQ8IWF6 608 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 ENDOVQ8N8Q3 282 aaKnown RBP12.55□□□□□ -0.4
NPAS3-209ENST00000551008 OR2L8Q8NGY9 312 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 C9orf43Q8TAL5 461 aaPredicted RBP12.55□□□□□ -0.4
NPAS3-209ENST00000551008 FAM136AQ96C01 138 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 TCTN2Q96GX1 697 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 SIGLEC10Q96LC7 697 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 GPR87Q9BY21 358 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 PLAC1Q9HBJ0 212 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 TRMT1Q9NXH9 659 aaKnown RBP12.55□□□□□ -0.4
NPAS3-209ENST00000551008 ANAPC5Q9UJX4 755 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 FARSAQ9Y285 508 aaKnown RBP12.55□□□□□ -0.4
NPAS3-209ENST00000551008 TP53TG5Q9Y2B4 290 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 CRYL1Q9Y2S2 319 aa12.55□□□□□ -0.4
NPAS3-209ENST00000551008 ISM1B1AKI9 464 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 RAB40ALP0C0E4 278 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 CYP2A7P20853 494 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 IVDP26440 423 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 PSMB5P28074 263 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 PPARGP37231 505 aaPredicted RBP12.54□□□□□ -0.4
NPAS3-209ENST00000551008 CHAF1BQ13112 559 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 ACSBG2Q5FVE4 666 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.54□□□□□ -0.4
NPAS3-209ENST00000551008 RNASEH2BQ5TBB1 312 aaKnown RBP12.54□□□□□ -0.4
NPAS3-209ENST00000551008 ARMC3Q5W041 872 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 NEPROQ6NW34 567 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 ZNF669Q96BR6 464 aaPredicted RBP12.54□□□□□ -0.4
NPAS3-209ENST00000551008 CLIP3Q96DZ5 547 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 PDLIM2Q96JY6 352 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 GBP5Q96PP8 586 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 PANX3Q96QZ0 392 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 TCF12Q99081 682 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 NLNQ9BYT8 704 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 FAM117AQ9C073 453 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 EPN3Q9H201 632 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 SYNPO2LQ9H987 977 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 FANCEQ9HB96 536 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 SLC22A11Q9NSA0 550 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 TSR3Q9UJK0 312 aaKnown RBP12.54□□□□□ -0.4
NPAS3-209ENST00000551008 TLK1Q9UKI8 766 aa12.54□□□□□ -0.4
NPAS3-209ENST00000551008 ARHGEF33A8MVX0 844 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 E7EQ34 232 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 F8W8V4 182 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 CES2O00748 559 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 KIF5CO60282 957 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 CTSVO60911 334 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 BANF1O75531 89 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 KLF7O75840 302 aaPredicted RBP12.53□□□□□ -0.4
NPAS3-209ENST00000551008 MED26O95402 600 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 MATN4O95460 622 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 ESR1P03372 595 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 ERGP11308 486 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 PTGIRP43119 386 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 FNTAP49354 379 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 CLCN7P51798 805 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 TIAL1Q01085 375 aaKnown RBP eCLIP12.53□□□□□ -0.4
NPAS3-209ENST00000551008 FASTKQ14296 549 aaKnown RBP12.53□□□□□ -0.4
NPAS3-209ENST00000551008 NCF4Q15080 339 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 TMED2Q15363 201 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 MSS51Q4VC12 460 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 ZNF470Q6ECI4 717 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 MRNIPQ6NTE8 343 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 CNSTQ6PJW8 725 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 OTUD6BQ8N6M0 293 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 HMGCLL1Q8TB92 370 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 ZNF285Q96NJ3 590 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 WDR83Q9BRX9 315 aaKnown RBP12.53□□□□□ -0.4
NPAS3-209ENST00000551008 TSSK1BQ9BXA7 367 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 DDX47Q9H0S4 455 aaKnown RBP12.53□□□□□ -0.4
NPAS3-209ENST00000551008 XAB2Q9HCS7 855 aaKnown RBP12.53□□□□□ -0.4
NPAS3-209ENST00000551008 DHCR7Q9UBM7 475 aaKnown RBP12.53□□□□□ -0.4
NPAS3-209ENST00000551008 SERTAD3Q9UJW9 196 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 TCFL5Q9UL49 500 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 MAN2B2Q9Y2E5 1009 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 DOPEY2Q9Y3R5 2298 aa12.53□□□□□ -0.4
NPAS3-209ENST00000551008 SDR42E2A6NKP2 422 aa12.52□□□□□ -0.41
NPAS3-209ENST00000551008 NRDCO43847 1150 aa12.52□□□□□ -0.41
NPAS3-209ENST00000551008 RFPL1O75677 317 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms