RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PCDHB3Q9Y5E6 796 aa16.64■□□□□ 0.25
CHMP1A-208ENST00000550102 FAM187AA6NFU0 413 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 CATP04040 527 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 NTRK1P04629 796 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 ELK3P41970 407 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 RPL21P46778 160 aaKnown RBP16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 ITGA1P56199 1179 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 CYP4F2P78329 520 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 MC1RQ01726 317 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 KLHL38Q2WGJ6 581 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 CDHR3Q6ZTQ4 885 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 KIAA0408Q6ZU52 694 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 NEK10Q6ZWH5 1172 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 TAX1BP1Q86VP1 789 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 IGDCC3Q8IVU1 814 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 CNTN4Q8IWV2 1026 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 BBOF1Q8ND07 529 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 OR1L3Q8NH93 324 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 CHRNA10Q9GZZ6 450 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 SPATA7Q9P0W8 599 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 GALPQ9UBC7 116 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 IL17BQ9UHF5 180 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 PADI1Q9ULC6 663 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 MED16Q9Y2X0 877 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 TEX264Q9Y6I9 313 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 ANKRD12Q6UB98 2062 aa16.63■□□□□ 0.25
CHMP1A-208ENST00000550102 SPTA1P02549 2419 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 ARHGEF33A8MVX0 844 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 C21orf140B9A014 251 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 VPS26AO75436 327 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 ENO3P13929 434 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 C2orf54Q08AI8 447 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 CDC20Q12834 499 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 CALCOCO2Q13137 446 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 DNASE1L3Q13609 305 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 HP1BP3Q5SSJ5 553 aaPredicted RBP16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 STEAP4Q687X5 459 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 MAATS1Q7Z4T9 603 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 GPR135Q8IZ08 494 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 CD200R1Q8TD46 325 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 CT55Q8WUE5 264 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 PWWP2AQ96N64 755 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 GPR21Q99679 349 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 SLC30A3Q99726 388 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 WDR83Q9BRX9 315 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 AARSD1Q9BTE6 412 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 PPANQ9NQ55 473 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 LHX9Q9NQ69 397 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 INTS7Q9NVH2 962 aaKnown RBP16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 SERTAD3Q9UJW9 196 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 KCND3Q9UK17 655 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 SEC16AO15027 2179 aa16.62■□□□□ 0.25
CHMP1A-208ENST00000550102 HEATR5BQ9P2D3 2071 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 SMG1Q96Q15 3661 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 BOD1L1Q8NFC6 3051 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 KRT87PA6NCN2 255 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 TERTO14746 1132 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 TP73O15350 636 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 PSIP1O75475 530 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 HAUS5O94927 633 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 FKBP9O95302 570 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 CBSLP0DN79 551 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 PRKAR1AP10644 381 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 MAGP20916 626 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 CBSP35520 551 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 GPS2Q13227 327 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 CUL1Q13616 776 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 ZIC1Q15915 447 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 DEFB110Q30KQ9 67 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 CCSMST1Q4G0I0 132 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 GALNT7Q86SF2 657 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 C2orf73Q8N5S3 287 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 HMGCLL1Q8TB92 370 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 INPP5DQ92835 1189 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 EXTL1Q92935 676 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 C16orf45Q96MC5 204 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 LRFN5Q96NI6 719 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 CATSPER2Q96P56 530 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 ARHGAP9Q9BRR9 750 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 ACTR5Q9H9F9 607 aaPredicted RBP16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 PLAC1Q9HBJ0 212 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 FAM60AQ9NP50 221 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 TRMT6Q9UJA5 497 aaKnown RBP16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 SNX24Q9Y343 169 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 DHRS7Q9Y394 339 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 PCDHGA6Q9Y5G7 932 aa16.61■□□□□ 0.25
CHMP1A-208ENST00000550102 E7EQ34 232 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 MYO1CO00159 1063 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 EIF3FO00303 357 aaPredicted RBP16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 RAD51CO43502 376 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 OR2B3O76000 313 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 KLK3P07288 261 aaPredicted RBP16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 TCN2P20062 427 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 F8A1P23610 371 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 CARSP49589 748 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 MRPS25P82663 173 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 PDIA2Q13087 525 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 FRG1Q14331 258 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 SF1Q15637 639 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms