RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 STK16O75716 305 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 CPSF4O95639 269 aaKnown RBP11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 IL6P05231 212 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 JUNBP17275 347 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 HMGCLP35914 325 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 TGFBR1P36897 503 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 CSKP41240 450 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 CD97P48960 835 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 DNASE1L3Q13609 305 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 TRIM71Q2Q1W2 868 aaKnown RBP11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 SLC16A12Q6ZSM3 486 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 ANKS3Q6ZW76 656 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 CEP68Q76N32 757 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 VTCN1Q7Z7D3 282 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 TSPAN33Q86UF1 283 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 RBFAQ8N0V3 343 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 AADATQ8N5Z0 425 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 ZBTB8BQ8NAP8 495 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 DBF4BQ8NFT6 615 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 ZFP90Q8TF47 636 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 TAMM41Q96BW9 452 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 SH3GL1Q99961 368 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 POLE4Q9NR33 117 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 DCAF13Q9NV06 445 aaKnown RBP11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 MTRRQ9UBK8 725 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 VPS51Q9UID3 782 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 PAIP2BQ9ULR5 123 aaKnown RBP11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 PCDHB1Q9Y5F3 818 aa11.65□□□□□ -0.54
RAPGEF3-219ENST00000549151 ZNF99A8MXY4 864 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 HPRP00739 348 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ZDHHC11BP0C7U3 371 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 PORP16435 677 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ITPKAP23677 461 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 EPHA2P29317 976 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 AQP1P29972 269 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 MAGEA10P43363 369 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 MRPL19P49406 292 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 SMAD3P84022 425 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 MAD2L1Q13257 205 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 CDK5R2Q13319 367 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 NFATC2Q13469 925 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 TUBA3CQ13748 450 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 SF1Q15637 639 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 NPTX1Q15818 432 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 CARD16Q5EG05 197 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 KIAA1841Q6NSI8 718 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ADCK1Q86TW2 530 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 CYP4Z1Q86W10 505 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 SVOPLQ8N434 492 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 DPH2Q9BQC3 489 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ACPTQ9BZG2 426 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 GPN2Q9H9Y4 310 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 TRPM5Q9NZQ8 1165 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 LHX3Q9UBR4 397 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 CHD5Q8TDI0 1954 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 CLDN25C9JDP6 229 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 TMEM189-UBE2V1I3L0A0 370 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 IFRD1O00458 451 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 RFXANKO14593 260 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 MRPL58Q14197 206 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 PRR23BQ6ZRT6 265 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ZNF621Q6ZSS3 439 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 TMEM132CQ8N3T6 1108 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ZCCHC7Q8N3Z6 543 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ATG16L2Q8NAA4 619 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ZNF540Q8NDQ6 660 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 FKBP10Q96AY3 582 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 PPP1R14BQ96C90 147 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 SH3YL1Q96HL8 342 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ZIC5Q96T25 663 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 TTPALQ9BTX7 342 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 AMBNQ9NP70 447 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 KIF17Q9P2E2 1029 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 TMEFF2Q9UIK5 374 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 OARD1Q9Y530 152 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 MKI67P46013 3256 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 GLYATL1P3A0A0U1RQE8 302 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 MANSC4A6NHS7 340 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 TBKBP1A7MCY6 615 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 KRT6AP02538 564 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 KRT6BP04259 564 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 KRT6CP48668 564 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 RPIAP49247 311 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 EIF2B2P49770 351 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 CASP9P55211 416 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 NCS1P62166 190 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ZXDBP98169 803 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 EPS8Q12929 822 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 BOP1Q14137 746 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 CHPT1Q8WUD6 406 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 RPL3LQ92901 407 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 PYURFQ96I23 114 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 TPD52L3Q96J77 140 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 SPATA17Q96L03 361 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 CCDC115Q96NT0 180 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ATG10Q9H0Y0 220 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 CLMPQ9H6B4 373 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 ENPP5Q9UJA9 477 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 GMPPBQ9Y5P6 360 aa11.64□□□□□ -0.55
RAPGEF3-219ENST00000549151 CLDN9O95484 217 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms