RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 GSTM4Q03013 218 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 HSPA14Q0VDF9 509 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 BOP1Q14137 746 aaKnown RBP16.92■□□□□ 0.3
HDAC7-227ENST00000548080 CLCA4Q14CN2 919 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 HES3Q5TGS1 186 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 DUS1LQ6P1R4 473 aaKnown RBP16.92■□□□□ 0.3
HDAC7-227ENST00000548080 PIGWQ7Z7B1 504 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 GPSM1Q86YR5 675 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 CFAP206Q8IYR0 622 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 SFRP1Q8N474 314 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 SPDYE1Q8NFV5 336 aaPredicted RBP16.92■□□□□ 0.3
HDAC7-227ENST00000548080 OR2L2Q8NH16 312 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 ASZ1Q8WWH4 475 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 NAT6Q93015 286 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 EXT2Q93063 718 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 C7orf26Q96N11 449 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 ELAC2Q9BQ52 826 aaKnown RBP16.92■□□□□ 0.3
HDAC7-227ENST00000548080 SCNM1Q9BWG6 230 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 WWP1Q9H0M0 922 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 ABCG4Q9H172 646 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 TSR3Q9UJK0 312 aaKnown RBP16.92■□□□□ 0.3
HDAC7-227ENST00000548080 TMCO1Q9UM00 188 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 COL27A1Q8IZC6 1860 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-227ENST00000548080 UNC13CQ8NB66 2214 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 SUPT3HB4E1H0 165 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 UBXN8O00124 270 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 SUPT3HO75486 399 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 GPC4O75487 556 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 RPLP0P05388 317 aaKnown RBP16.91■□□□□ 0.3
HDAC7-227ENST00000548080 MTHFD2P13995 350 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 GLB1P16278 677 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 ALDH4A1P30038 563 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 NAGLUP54802 743 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 ABCE1P61221 599 aaKnown RBP16.91■□□□□ 0.3
HDAC7-227ENST00000548080 NFKB2Q00653 900 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 AMZ1Q400G9 498 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 NEK10Q6ZWH5 1172 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 ADAMTSL2Q86TH1 951 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 HM13Q8TCT9 377 aa16.91■□□□□ 0.3
HDAC7-227ENST00000548080 JPH3Q8WXH2 748 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-227ENST00000548080 LINC00615Q96LM1 132 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-227ENST00000548080 ZNF624Q9P2J8 865 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-227ENST00000548080 ATXN7L1Q9ULK2 861 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-227ENST00000548080 AKAP13Q12802 2813 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 AGRPO00253 132 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 ITM2AO43736 263 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 SLCO2B1O94956 709 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 GFAPP14136 432 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 IMPDH1P20839 514 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 PDHA2P29803 388 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 SLC19A1P41440 591 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 PPM1FP49593 454 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-227ENST00000548080 HHEXQ03014 270 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 DMPKQ09013 629 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 SYTL3Q4VX76 610 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 GKAP1Q5VSY0 366 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-227ENST00000548080 CGB2Q6NT52 195 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 SPRED1Q7Z699 444 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 CRLF3Q8IUI8 442 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 CCNYL1Q8N7R7 359 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 PHF21BQ96EK2 531 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 ZNF395Q9H8N7 513 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-227ENST00000548080 COG4Q9H9E3 785 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 CPNE7Q9UBL6 633 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 WASF3Q9UPY6 502 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 CDYLQ9Y232 598 aa16.9■□□□□ 0.3
HDAC7-227ENST00000548080 DNMT3AQ9Y6K1 912 aaPredicted RBP16.9■□□□□ 0.3
HDAC7-227ENST00000548080 A0A1W2PQM1 296 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 SLC5A10A0PJK1 596 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 NUDT21O43809 227 aaKnown RBP16.89■□□□□ 0.29
HDAC7-227ENST00000548080 KLK8O60259 260 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 SNX3O60493 162 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 NPHS1O60500 1241 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 LYPLA1O75608 230 aaPredicted RBP16.89■□□□□ 0.29
HDAC7-227ENST00000548080 TGDSO95455 350 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 GP1BAP07359 652 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 MAPK9P45984 424 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 ILKQ13418 452 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 PFKFB4Q16877 469 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 ZNF658BQ4V348 819 aaPredicted RBP16.89■□□□□ 0.29
HDAC7-227ENST00000548080 CFAP157Q5JU67 520 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.89■□□□□ 0.29
HDAC7-227ENST00000548080 NKAIN2Q5VXU1 208 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 METRNLQ641Q3 311 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 SBSNQ6UWP8 590 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 FRA10AC1Q70Z53 315 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 VRK3Q8IV63 474 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 TRIM48Q8IWZ4 208 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 FBXO39Q8N4B4 442 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 PTGR2Q8N8N7 351 aaPredicted RBP16.89■□□□□ 0.29
HDAC7-227ENST00000548080 PPP4R1Q8TF05 950 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 TMEM159Q96B96 161 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 RMDN2Q96LZ7 410 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 C20orf27Q9GZN8 174 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 DRC3Q9H069 523 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 IMP3Q9NV31 184 aaKnown RBP16.89■□□□□ 0.29
HDAC7-227ENST00000548080 NUDT4Q9NZJ9 180 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 OARD1Q9Y530 152 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 CEP295Q9C0D2 2601 aa16.89■□□□□ 0.29
HDAC7-227ENST00000548080 KIR2DS5A0A0G2JLQ3 304 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms