RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 KIR2DS3Q14952 304 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 TSTD2Q5T7W7 516 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 TTLL10Q6ZVT0 673 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 PRUNE1Q86TP1 453 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 LDB1Q86U70 411 aaPredicted RBP19.59■□□□□ 0.73
SSH1-207ENST00000547862 SYCE1Q8N0S2 351 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 KRT222Q8N1A0 295 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 DNAJC22Q8N4W6 341 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 METTL27Q8N6F8 245 aaPredicted RBP19.59■□□□□ 0.73
SSH1-207ENST00000547862 ZNF778Q96MU6 729 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 TTC1Q99614 292 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 ETNK1Q9HBU6 452 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 C5AR2Q9P296 337 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 TSR3Q9UJK0 312 aaKnown RBP19.59■□□□□ 0.73
SSH1-207ENST00000547862 B3GNT3Q9Y2A9 372 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 MDC1Q14676 2089 aaKnown RBP19.59■□□□□ 0.73
SSH1-207ENST00000547862 TEX15Q9BXT5 2789 aa19.59■□□□□ 0.73
SSH1-207ENST00000547862 UMODP07911 640 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 MCM3P25205 808 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 ITGA3P26006 1051 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 CCR7P32248 378 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 RAB28P51157 221 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 FASTKD1Q53R41 847 aaKnown RBP19.58■□□□□ 0.72
SSH1-207ENST00000547862 SEL1L2Q5TEA6 688 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 SHISA6Q6ZSJ9 500 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 LINC01555Q8NAE3 123 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 DLG3Q92796 817 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 TSSK1BQ9BXA7 367 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 EURLQ9NYK6 297 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 CDC23Q9UJX2 597 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 CAPN6Q9Y6Q1 641 aa19.58■□□□□ 0.72
SSH1-207ENST00000547862 F8W8V4 182 aa19.57■□□□□ 0.72
SSH1-207ENST00000547862 ETS1P14921 441 aa19.57■□□□□ 0.72
SSH1-207ENST00000547862 VARSP26640 1264 aaKnown RBP19.57■□□□□ 0.72
SSH1-207ENST00000547862 PLOD1Q02809 727 aaPredicted RBP19.57■□□□□ 0.72
SSH1-207ENST00000547862 SNX1Q13596 522 aa19.57■□□□□ 0.72
SSH1-207ENST00000547862 DNAJC21Q5F1R6 531 aaKnown RBP19.57■□□□□ 0.72
SSH1-207ENST00000547862 DCUN1D3Q8IWE4 304 aa19.57■□□□□ 0.72
SSH1-207ENST00000547862 SLC22A15Q8IZD6 547 aa19.57■□□□□ 0.72
SSH1-207ENST00000547862 OR4L1Q8NH43 312 aa19.57■□□□□ 0.72
SSH1-207ENST00000547862 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.57■□□□□ 0.72
SSH1-207ENST00000547862 PTERQ96BW5 349 aa19.57■□□□□ 0.72
SSH1-207ENST00000547862 MRFAP1L1Q96HT8 127 aa19.57■□□□□ 0.72
SSH1-207ENST00000547862 BAG1Q99933 345 aaPredicted RBP19.57■□□□□ 0.72
SSH1-207ENST00000547862 ZNF552Q9H707 407 aaPredicted RBP19.57■□□□□ 0.72
SSH1-207ENST00000547862 ZBTB20Q9HC78 741 aaPredicted RBP19.57■□□□□ 0.72
SSH1-207ENST00000547862 CUEDC1Q9NWM3 386 aaPredicted RBP19.57■□□□□ 0.72
SSH1-207ENST00000547862 FBXL4Q9UKA2 621 aa19.57■□□□□ 0.72
SSH1-207ENST00000547862 A0A1B0GX78 115 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 KRT87PA6NCN2 255 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 IGHEP01854 428 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 RPN2P04844 631 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 COL8A1P27658 744 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 FDFT1P37268 417 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 GRIA3P42263 894 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 BDKRB1P46663 353 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 GLRBP48167 497 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 KIF5AQ12840 1032 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 TMED2Q15363 201 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 MRPL14Q6P1L8 145 aaKnown RBP19.56■□□□□ 0.72
SSH1-207ENST00000547862 ZNF534Q76KX8 674 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 MCATQ8IVS2 390 aaKnown RBP19.56■□□□□ 0.72
SSH1-207ENST00000547862 ZADH2Q8N4Q0 377 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 OTUD6BQ8N6M0 293 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 PPHLN1Q8NEY8 458 aaKnown RBP19.56■□□□□ 0.72
SSH1-207ENST00000547862 SKA2Q8WVK7 121 aaPredicted RBP19.56■□□□□ 0.72
SSH1-207ENST00000547862 INPP5DQ92835 1189 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 CHRNA10Q9GZZ6 450 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 SOX17Q9H6I2 414 aaPredicted RBP19.56■□□□□ 0.72
SSH1-207ENST00000547862 SLC6A20Q9NP91 592 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 RAB6BQ9NRW1 208 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 SLC22A11Q9NSA0 550 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 ERRFI1Q9UJM3 462 aaPredicted RBP19.56■□□□□ 0.72
SSH1-207ENST00000547862 ANAPC5Q9UJX4 755 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 SLC39A10Q9ULF5 831 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 RUVBL2Q9Y230 463 aaKnown RBP19.56■□□□□ 0.72
SSH1-207ENST00000547862 TCAF1Q9Y4C2 921 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 CSAG2Q9Y5P2 127 aa19.56■□□□□ 0.72
SSH1-207ENST00000547862 LIASO43766 372 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 APOA4P06727 396 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 CD63P08962 238 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 ITGAXP20702 1163 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 PSMA3P25788 255 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 PSMB5P28074 263 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 ELOAQ14241 798 aaKnown RBP19.55■□□□□ 0.72
SSH1-207ENST00000547862 HIF1AQ16665 826 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 DTWD1Q8N5C7 304 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 C1orf54Q8WWF1 131 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 TM9SF4Q92544 642 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 ATP13A2Q9NQ11 1180 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 CATSPERZQ9NTU4 200 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 MARCH4Q9P2E8 410 aaPredicted RBP19.55■□□□□ 0.72
SSH1-207ENST00000547862 CTSFQ9UBX1 484 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 ZNF148Q9UQR1 794 aa19.55■□□□□ 0.72
SSH1-207ENST00000547862 ANKUB1A6NFN9 424 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 ERI2A8K979 691 aaKnown RBP19.54■□□□□ 0.72
SSH1-207ENST00000547862 AGPSO00116 658 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 IPO13O94829 963 aaKnown RBP19.54■□□□□ 0.72
SSH1-207ENST00000547862 APRTP07741 180 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 CD9P21926 228 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms