RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 EURLQ9NYK6 297 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 SAMD15Q9P1V8 674 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 MARCH4Q9P2E8 410 aaPredicted RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 IFT80Q9P2H3 777 aaPredicted RBP9.02□□□□□ -0.97
YBX3-218ENST00000546298 NDOR1Q9UHB4 597 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 SOX13Q9UN79 622 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 CDYLQ9Y232 598 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 PPP2R2CQ9Y2T4 447 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 ZNF451Q9Y4E5 1061 aa9.02□□□□□ -0.97
YBX3-218ENST00000546298 TTLL8A6PVC2 850 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 TARM1B6A8C7 271 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 K7EM74 188 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 DPM1O60762 260 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 CEACAM4O75871 244 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 KRT14P02533 472 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 ESR1P03372 595 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 CBSLP0DN79 551 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 MLNP12872 115 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 NR1D1P20393 614 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 OGNP20774 298 aaKnown RBP9.01□□□□□ -0.97
YBX3-218ENST00000546298 MAGP20916 626 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 VARSP26640 1264 aaKnown RBP9.01□□□□□ -0.97
YBX3-218ENST00000546298 ATP5DP30049 168 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 CXCR5P32302 372 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 CBSP35520 551 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 MAGEA6P43360 314 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 ADARP55265 1226 aaKnown RBP9.01□□□□□ -0.97
YBX3-218ENST00000546298 CRADDP78560 199 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 GPS1Q13098 491 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 CHAF1BQ13112 559 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 SF1Q15637 639 aaKnown RBP9.01□□□□□ -0.97
YBX3-218ENST00000546298 IGFBP7Q16270 282 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 DEFB110Q30KQ9 67 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 NKAIN1Q4KMZ8 207 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 TCTE1Q5JU00 501 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 CPZQ66K79 652 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 KIAA0930Q6ICG6 404 aaPredicted RBP9.01□□□□□ -0.97
YBX3-218ENST00000546298 CASC4Q6P4E1 433 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 ZBTB2Q8N680 514 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 EFCAB3Q8N7B9 438 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 PRELID2Q8N945 189 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 MAGOHBQ96A72 148 aaKnown RBP9.01□□□□□ -0.97
YBX3-218ENST00000546298 PTERQ96BW5 349 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 MFSD3Q96ES6 412 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 GBP5Q96PP8 586 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 XAB2Q9HCS7 855 aaKnown RBP9.01□□□□□ -0.97
YBX3-218ENST00000546298 SYBUQ9NX95 663 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 DHCR7Q9UBM7 475 aaKnown RBP9.01□□□□□ -0.97
YBX3-218ENST00000546298 TTC7AQ9ULT0 858 aaPredicted RBP9.01□□□□□ -0.97
YBX3-218ENST00000546298 JRKLQ9Y4A0 524 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 MGAQ8IWI9 3026 aa9.01□□□□□ -0.97
YBX3-218ENST00000546298 TLN1Q9Y490 2541 aaKnown RBP9□□□□□ -0.97
YBX3-218ENST00000546298 PIEZO2Q9H5I5 2752 aa9□□□□□ -0.97
YBX3-218ENST00000546298 SDR42E2A6NKP2 422 aa9□□□□□ -0.97
YBX3-218ENST00000546298 H3BMH7 237 aa9□□□□□ -0.97
YBX3-218ENST00000546298 ZNF185O15231 689 aa9□□□□□ -0.97
YBX3-218ENST00000546298 SRPX2O60687 465 aaPredicted RBP9□□□□□ -0.97
YBX3-218ENST00000546298 KLF7O75840 302 aaPredicted RBP9□□□□□ -0.97
YBX3-218ENST00000546298 C1orf105O95561 183 aa9□□□□□ -0.97
YBX3-218ENST00000546298 CHRM3P20309 590 aa9□□□□□ -0.97
YBX3-218ENST00000546298 ALAS2P22557 587 aa9□□□□□ -0.97
YBX3-218ENST00000546298 PEBP1P30086 187 aaKnown RBP9□□□□□ -0.97
YBX3-218ENST00000546298 FMO4P31512 558 aa9□□□□□ -0.97
YBX3-218ENST00000546298 OTX2P32243 289 aa9□□□□□ -0.97
YBX3-218ENST00000546298 VPS41P49754 854 aa9□□□□□ -0.97
YBX3-218ENST00000546298 CCZ1BP86790 482 aa9□□□□□ -0.97
YBX3-218ENST00000546298 CCZ1P86791 482 aaPredicted RBP9□□□□□ -0.97
YBX3-218ENST00000546298 ATP1A4Q13733 1029 aa9□□□□□ -0.97
YBX3-218ENST00000546298 THOC5Q13769 683 aaKnown RBP9□□□□□ -0.97
YBX3-218ENST00000546298 GRB7Q14451 532 aa9□□□□□ -0.97
YBX3-218ENST00000546298 GRM7Q14831 915 aa9□□□□□ -0.97
YBX3-218ENST00000546298 TRIP13Q15645 432 aaPredicted RBP9□□□□□ -0.97
YBX3-218ENST00000546298 TYSND1Q2T9J0 566 aa9□□□□□ -0.97
YBX3-218ENST00000546298 FAM214AQ32MH5 1076 aa9□□□□□ -0.97
YBX3-218ENST00000546298 TTLL9Q3SXZ7 439 aa9□□□□□ -0.97
YBX3-218ENST00000546298 C1orf189Q5VU69 101 aa9□□□□□ -0.97
YBX3-218ENST00000546298 NEPROQ6NW34 567 aa9□□□□□ -0.97
YBX3-218ENST00000546298 FIGLAQ6QHK4 219 aa9□□□□□ -0.97
YBX3-218ENST00000546298 CES3Q6UWW8 571 aa9□□□□□ -0.97
YBX3-218ENST00000546298 MRGPREQ86SM8 312 aa9□□□□□ -0.97
YBX3-218ENST00000546298 TAX1BP1Q86VP1 789 aa9□□□□□ -0.97
YBX3-218ENST00000546298 C2orf73Q8N5S3 287 aaPredicted RBP9□□□□□ -0.97
YBX3-218ENST00000546298 LMNTD1Q8N9Z9 388 aa9□□□□□ -0.97
YBX3-218ENST00000546298 TTC29Q8NA56 475 aaPredicted RBP9□□□□□ -0.97
YBX3-218ENST00000546298 LINC01555Q8NAE3 123 aa9□□□□□ -0.97
YBX3-218ENST00000546298 MCUQ8NE86 351 aa9□□□□□ -0.97
YBX3-218ENST00000546298 OR2Y1Q8NGV0 311 aa9□□□□□ -0.97
YBX3-218ENST00000546298 HMGCLL1Q8TB92 370 aa9□□□□□ -0.97
YBX3-218ENST00000546298 LPGAT1Q92604 370 aa9□□□□□ -0.97
YBX3-218ENST00000546298 MIB2Q96AX9 1013 aa9□□□□□ -0.97
YBX3-218ENST00000546298 NACC2Q96BF6 587 aa9□□□□□ -0.97
YBX3-218ENST00000546298 VPS50Q96JG6 964 aa9□□□□□ -0.97
YBX3-218ENST00000546298 IL17FQ96PD4 163 aa9□□□□□ -0.97
YBX3-218ENST00000546298 MENTQ9BUN1 341 aa9□□□□□ -0.97
YBX3-218ENST00000546298 FAM114A2Q9NRY5 505 aa9□□□□□ -0.97
YBX3-218ENST00000546298 GPR83Q9NYM4 423 aa9□□□□□ -0.97
YBX3-218ENST00000546298 IL1RAPL1Q9NZN1 696 aa9□□□□□ -0.97
YBX3-218ENST00000546298 SPATA7Q9P0W8 599 aa9□□□□□ -0.97
YBX3-218ENST00000546298 C5AR2Q9P296 337 aa9□□□□□ -0.97
YBX3-218ENST00000546298 PTRH2Q9Y3E5 179 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms