RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 HIST1H2AHQ96KK5 128 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 PPM1MQ96MI6 270 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 ZNF578Q96N58 590 aaPredicted RBP16.27■□□□□ 0.2
LTBR-215ENST00000546296 OR2A14Q96R47 310 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 TAAR9Q96RI9 348 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 HIST1H2AJQ99878 128 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 H2AFJQ9BTM1 129 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 MENTQ9BUN1 341 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 FUT8Q9BYC5 575 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 TRIM54Q9BYV2 358 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 PARVBQ9HBI1 364 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.27■□□□□ 0.2
LTBR-215ENST00000546296 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.27■□□□□ 0.2
LTBR-215ENST00000546296 ADAMTS6Q9UKP5 1117 aa16.27■□□□□ 0.2
LTBR-215ENST00000546296 V9GYY5 206 aaPredicted RBP16.27■□□□□ 0.2
LTBR-215ENST00000546296 COL27A1Q8IZC6 1860 aaPredicted RBP16.27■□□□□ 0.19
LTBR-215ENST00000546296 CHD8Q9HCK8 2581 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 ZNF839A8K0R7 811 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 POC1B-GALNT4F8VUJ3 575 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 TSPAN12O95859 305 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 INHBAP08476 426 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 ZNF37AP17032 561 aaPredicted RBP16.26■□□□□ 0.19
LTBR-215ENST00000546296 TNFRSF8P28908 595 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 MSH2P43246 934 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 ERVPABLB-1P60509 514 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 SP140Q13342 867 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 TSTA3Q13630 321 aaPredicted RBP16.26■□□□□ 0.19
LTBR-215ENST00000546296 SF1Q15637 639 aaKnown RBP16.26■□□□□ 0.19
LTBR-215ENST00000546296 CYP2A13Q16696 494 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 TBC1D25Q3MII6 688 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 DCAF12Q5T6F0 453 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 MROH9Q5TGP6 573 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 IGF2-ASQ6U949 168 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 TMEM207Q6UWW9 146 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 RAPH1Q70E73 1250 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 TRIM73Q86UV7 250 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.26■□□□□ 0.19
LTBR-215ENST00000546296 PDLIM5Q96HC4 596 aaKnown RBP16.26■□□□□ 0.19
LTBR-215ENST00000546296 SLC41A2Q96JW4 573 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 CNTNAP3BQ96NU0 1288 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 CTRCQ99895 268 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 SLC12A9Q9BXP2 914 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 CNTNAP3Q9BZ76 1288 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 KLHL25Q9H0H3 589 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 ASCL3Q9NQ33 180 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 SEMA5BQ9P283 1151 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 DKK4Q9UBT3 224 aa16.26■□□□□ 0.19
LTBR-215ENST00000546296 POLR1CO15160 346 aaPredicted RBP16.25■□□□□ 0.19
LTBR-215ENST00000546296 PHGDHO43175 533 aaKnown RBP16.25■□□□□ 0.19
LTBR-215ENST00000546296 RIPK2O43353 540 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 MYBL2P10244 700 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 PVRP15151 417 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 CRABP2P29373 138 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 SLC5A2P31639 672 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 PNLIPRP1P54315 467 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 RAB15P59190 212 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 RAB10P61026 200 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 SH3BP2P78314 561 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 BMPR2Q13873 1038 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 KCNAB1Q14722 419 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 ARHGAP19Q14CB8 494 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 SLC5A12Q1EHB4 618 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 TAOK1Q7L7X3 1001 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 SYTL1Q8IYJ3 562 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 BMPERQ8N8U9 685 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 DENND1AQ8TEH3 1009 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 ANKRD49Q8WVL7 239 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 SMPDL3AQ92484 453 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 FGF11Q92914 225 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 CCDC138Q96M89 665 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 TRAPPC9Q96Q05 1148 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 OR6C1Q96RD1 312 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 PITPNM3Q9BZ71 974 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 ASPSCR1Q9BZE9 553 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 PDE7BQ9NP56 450 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 FBXO8Q9NRD0 319 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 PDE10AQ9Y233 779 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 PCDHB11Q9Y5F2 797 aa16.25■□□□□ 0.19
LTBR-215ENST00000546296 A0A0J9YY10 115 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 EXOC1LA0A1B0GW35 172 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 NVLO15381 856 aaKnown RBP16.24■□□□□ 0.19
LTBR-215ENST00000546296 PRAMEF10O60809 474 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 SLC16A8O95907 504 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 ABHD2P08910 425 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 EBLN1P0CF75 366 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 CCDC166P0CW27 439 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 FOLR1P15328 257 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 ST6GAL1P15907 406 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 OAS2P29728 719 aaKnown RBP16.24■□□□□ 0.19
LTBR-215ENST00000546296 PEBP1P30086 187 aaKnown RBP16.24■□□□□ 0.19
LTBR-215ENST00000546296 RPA3P35244 121 aaPredicted RBP16.24■□□□□ 0.19
LTBR-215ENST00000546296 ACY1Q03154 408 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 FASTKQ14296 549 aaKnown RBP16.24■□□□□ 0.19
LTBR-215ENST00000546296 CYB5D1Q6P9G0 228 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 CEACAM20Q6UY09 585 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 RASGRP3Q8IV61 690 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 HMGCLL1Q8TB92 370 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 SLC44A1Q8WWI5 657 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 DLG3Q92796 817 aa16.24■□□□□ 0.19
LTBR-215ENST00000546296 PAFAH2Q99487 392 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms