RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 KCNMB4Q86W47 210 aa22.44■■□□□ 1.18
CHFR-222ENST00000544093 LINC01555Q8NAE3 123 aa22.44■■□□□ 1.18
CHFR-222ENST00000544093 MR1Q95460 341 aa22.44■■□□□ 1.18
CHFR-222ENST00000544093 CLIP3Q96DZ5 547 aa22.44■■□□□ 1.18
CHFR-222ENST00000544093 EBNA1BP2Q99848 306 aaKnown RBP22.44■■□□□ 1.18
CHFR-222ENST00000544093 KLHL25Q9H0H3 589 aa22.44■■□□□ 1.18
CHFR-222ENST00000544093 SPATA7Q9P0W8 599 aa22.44■■□□□ 1.18
CHFR-222ENST00000544093 FBXO5Q9UKT4 447 aa22.44■■□□□ 1.18
CHFR-222ENST00000544093 MEN1O00255 615 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 CREG1O75629 220 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 ENO3P13929 434 aaPredicted RBP22.43■■□□□ 1.18
CHFR-222ENST00000544093 IVDP26440 423 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 PEBP1P30086 187 aaKnown RBP22.43■■□□□ 1.18
CHFR-222ENST00000544093 SLC1A2P43004 574 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 DHX9Q08211 1270 aaKnown RBP22.43■■□□□ 1.18
CHFR-222ENST00000544093 CTBP1Q13363 440 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 ZNF789Q5FWF6 425 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 SPANXN3Q5MJ09 141 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 CNSTQ6PJW8 725 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 TRIM73Q86UV7 250 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 DENND6AQ8IWF6 608 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 DSELQ8IZU8 1212 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 EXD3Q8N9H8 876 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 LRRC39Q96DD0 335 aa22.43■■□□□ 1.18
CHFR-222ENST00000544093 GEMIN8Q9NWZ8 242 aaKnown RBP22.43■■□□□ 1.18
CHFR-222ENST00000544093 BOD1L1Q8NFC6 3051 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 OR2B3O76000 313 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 FAM87AP0C7U9 286 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 PTPN4P29074 926 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 OAS2P29728 719 aaKnown RBP22.42■■□□□ 1.18
CHFR-222ENST00000544093 RORAP35398 523 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 CLCN7P51798 805 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 GPS2Q13227 327 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 NAA25Q14CX7 972 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 HSP90AA5PQ58FG0 334 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 C16orf46Q6P387 395 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 SYVN1Q86TM6 617 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 APOBEC4Q8WW27 367 aaKnown RBP22.42■■□□□ 1.18
CHFR-222ENST00000544093 RNF31Q96EP0 1072 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 C17orf62Q9BQA9 187 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 SEMA4CQ9C0C4 833 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 FBXO6Q9NRD1 293 aaPredicted RBP22.42■■□□□ 1.18
CHFR-222ENST00000544093 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.42■■□□□ 1.18
CHFR-222ENST00000544093 PLCL2Q9UPR0 1127 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 MRPS18BQ9Y676 258 aaKnown RBP22.42■■□□□ 1.18
CHFR-222ENST00000544093 NFS1Q9Y697 457 aa22.42■■□□□ 1.18
CHFR-222ENST00000544093 TLN1Q9Y490 2541 aaKnown RBP22.42■■□□□ 1.18
CHFR-222ENST00000544093 SEC16AO15027 2179 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 EIF3FO00303 357 aaPredicted RBP22.41■■□□□ 1.18
CHFR-222ENST00000544093 CATP04040 527 aaKnown RBP22.41■■□□□ 1.18
CHFR-222ENST00000544093 RAB40ALP0C0E4 278 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 CBSLP0DN79 551 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 CBSP35520 551 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 HSD17B2P37059 387 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 COL9A2Q14055 689 aaPredicted RBP22.41■■□□□ 1.18
CHFR-222ENST00000544093 SF1Q15637 639 aaKnown RBP22.41■■□□□ 1.18
CHFR-222ENST00000544093 ZIC1Q15915 447 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 LRRC8EQ6NSJ5 796 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 UGT3A1Q6NUS8 523 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 TLDC1Q6P9B6 456 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 KIAA0408Q6ZU52 694 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 SLC38A9Q8NBW4 561 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 DENND1AQ8TEH3 1009 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 ZUFSPQ96AP4 578 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 FAM136AQ96C01 138 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 SNF8Q96H20 258 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 ACTL8Q9H568 366 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 FAM60AQ9NP50 221 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 SRPK3Q9UPE1 567 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 POLHQ9Y253 713 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 SPTA1P02549 2419 aa22.41■■□□□ 1.18
CHFR-222ENST00000544093 ZNF839A8K0R7 811 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 TARM1B6A8C7 271 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 ZNF749O43361 778 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 VPS26AO75436 327 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 PSIP1O75475 530 aaKnown RBP22.4■■□□□ 1.18
CHFR-222ENST00000544093 MAGP20916 626 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 AGXTP21549 392 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 BDKRB1P46663 353 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 GABRA4P48169 554 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 POLE2P56282 527 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 ERV3-1Q14264 604 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 ARHGAP19Q14CB8 494 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 HIF1AQ16665 826 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 KLHL38Q2WGJ6 581 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 BBS9Q3SYG4 887 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 ACSBG2Q5FVE4 666 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 ZC3H12BQ5HYM0 836 aaKnown RBP22.4■■□□□ 1.18
CHFR-222ENST00000544093 HIBCHQ6NVY1 386 aaPredicted RBP22.4■■□□□ 1.18
CHFR-222ENST00000544093 DNAJC22Q8N4W6 341 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 LMNTD1Q8N9Z9 388 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 C2CD4AQ8NCU7 369 aaPredicted RBP22.4■■□□□ 1.18
CHFR-222ENST00000544093 BBOF1Q8ND07 529 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 INPP5DQ92835 1189 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 IL17FQ96PD4 163 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 NLNQ9BYT8 704 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 IARS2Q9NSE4 1012 aaKnown RBP22.4■■□□□ 1.18
CHFR-222ENST00000544093 PCMTD2Q9NV79 361 aa22.4■■□□□ 1.18
CHFR-222ENST00000544093 FARSAQ9Y285 508 aaKnown RBP22.4■■□□□ 1.18
CHFR-222ENST00000544093 DHRS7Q9Y394 339 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms