RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 MN1Q10571 1320 aaPredicted RBP13.19□□□□□ -0.3
SP140-213ENST00000543928 IGHV5-10-1A0A0J9YXX1 117 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 PIPSLA2A3N6 862 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 FAM149AA5PLN7 773 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 PABPN1LA6NDY0 278 aaKnown RBP13.19□□□□□ -0.3
SP140-213ENST00000543928 KLHL2O95198 593 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 SLC16A8O95907 504 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 C9P02748 559 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 FOXC1Q12948 553 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 CYP2A13Q16696 494 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 PPP1R3AQ16821 1122 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 ISXQ2M1V0 245 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 FAM83EQ2M2I3 478 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 SNAP47Q5SQN1 464 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 PHF19Q5T6S3 580 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 ANKS6Q68DC2 871 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 MBOAT1Q6ZNC8 495 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 FAM92BQ6ZTR7 304 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 FRA10AC1Q70Z53 315 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 TMPRSS7Q7RTY8 843 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 TAX1BP1Q86VP1 789 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 CYP4X1Q8N118 509 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 PLD6Q8N2A8 252 aaKnown RBP13.19□□□□□ -0.3
SP140-213ENST00000543928 GALNT15Q8N3T1 639 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 RIBC1Q8N443 379 aaPredicted RBP13.19□□□□□ -0.3
SP140-213ENST00000543928 DCBLD1Q8N8Z6 715 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 ZNF480Q8WV37 535 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 PTERQ96BW5 349 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 ZDHHC12Q96GR4 267 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 CCDC74BQ96LY2 380 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 CCDC138Q96M89 665 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 TMEM74Q96NL1 305 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 ARL15Q9NXU5 204 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 SPHK1Q9NYA1 384 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 UTP6Q9NYH9 597 aaKnown RBP13.19□□□□□ -0.3
SP140-213ENST00000543928 ACTR10Q9NZ32 417 aa13.19□□□□□ -0.3
SP140-213ENST00000543928 A8MU76 341 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 FOXO6A8MYZ6 492 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 C2orf74A8MZ97 194 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 ISM1B1AKI9 464 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 MATN2O00339 956 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 HYAL3O43820 417 aaPredicted RBP13.18□□□□□ -0.3
SP140-213ENST00000543928 KIF1CO43896 1103 aaKnown RBP13.18□□□□□ -0.3
SP140-213ENST00000543928 GUCA1CO95843 209 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 TOP3BO95985 862 aaKnown RBP13.18□□□□□ -0.3
SP140-213ENST00000543928 MT-ND3P03897 115 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 THRAP10827 490 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 ERGP11308 486 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 KRT15P19012 456 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 TFEBP19484 476 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 IMPA1P29218 277 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 PEBP1P30086 187 aaKnown RBP13.18□□□□□ -0.3
SP140-213ENST00000543928 CCKBRP32239 447 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 HSD17B2P37059 387 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 GLRBP48167 497 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 KPNA2P52292 529 aaKnown RBP13.18□□□□□ -0.3
SP140-213ENST00000543928 PNLIPRP1P54315 467 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 INHBCP55103 352 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 AP1S2P56377 157 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 ZFP36L1Q07352 338 aaKnown RBP13.18□□□□□ -0.3
SP140-213ENST00000543928 ZNF844Q08AG5 666 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 TARDBPQ13148 414 aaKnown RBP eCLIP13.18□□□□□ -0.3
SP140-213ENST00000543928 FASTKQ14296 549 aaKnown RBP13.18□□□□□ -0.3
SP140-213ENST00000543928 ARHGAP19Q14CB8 494 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 OR4D1Q15615 310 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 FBXO38Q6PIJ6 1188 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 ISCA2Q86U28 154 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 MARCH9Q86YJ5 346 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 SYTL1Q8IYJ3 562 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 IQCKQ8N0W5 287 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 CACTIN-AS1Q8N1I8 211 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 RCBTB1Q8NDN9 531 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 HMGCLL1Q8TB92 370 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 KIAA1191Q96A73 305 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 CABS1Q96KC9 395 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 ZIM3Q96PE6 472 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 TMEM109Q9BVC6 243 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 TWSG1Q9GZX9 223 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 ALG9Q9H6U8 611 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 PCMTD2Q9NV79 361 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
SP140-213ENST00000543928 STOX2Q9P2F5 926 aaPredicted RBP13.18□□□□□ -0.3
SP140-213ENST00000543928 PDP2Q9P2J9 529 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 POMT2Q9UKY4 750 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 OARD1Q9Y530 152 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 ENTPD2Q9Y5L3 495 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 PTPRBP23467 1997 aa13.18□□□□□ -0.3
SP140-213ENST00000543928 A0A1W2PPM1 405 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 ZNF839A8K0R7 811 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 E7ENX8 843 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 TMX2-CTNND1H3BSU7 103 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 GOLGA8RI6L899 631 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 RASSF9O75901 435 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 COL6A2P12110 1019 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 UGT2B7P16662 529 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 PRDX3P30048 256 aaKnown RBP13.17□□□□□ -0.3
SP140-213ENST00000543928 TAP2Q03519 686 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 TRA2AQ13595 282 aaKnown RBP eCLIP13.17□□□□□ -0.3
SP140-213ENST00000543928 TSTA3Q13630 321 aaPredicted RBP13.17□□□□□ -0.3
SP140-213ENST00000543928 KIR2DS3Q14952 304 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms