RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 SYF2O95926 243 aaKnown RBP14.59□□□□□ -0.07
CD9-210ENST00000543916 SLC35E2BP0CK96 405 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 CCDC166P0CW27 439 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 CYP2A7P20853 494 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 MAP4P27816 1152 aaKnown RBP14.59□□□□□ -0.07
CD9-210ENST00000543916 CSTF2P33240 577 aaKnown RBP eCLIP14.59□□□□□ -0.07
CD9-210ENST00000543916 MSH2P43246 934 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 CSRP3P50461 194 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 EIF3IQ13347 325 aaKnown RBP14.59□□□□□ -0.07
CD9-210ENST00000543916 FASTKQ14296 549 aaKnown RBP14.59□□□□□ -0.07
CD9-210ENST00000543916 KIR2DS3Q14952 304 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 CYP2A13Q16696 494 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 ANKS6Q68DC2 871 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 SPESP1Q6UW49 350 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 SBSNQ6UWP8 590 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 MBOAT1Q6ZNC8 495 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 TRIM73Q86UV7 250 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 SPATA6LQ8N4H0 392 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 BMPERQ8N8U9 685 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 HMGCLL1Q8TB92 370 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 UBLCP1Q8WVY7 318 aaPredicted RBP14.59□□□□□ -0.07
CD9-210ENST00000543916 PITPNM3Q9BZ71 974 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 UNKQ9C0B0 810 aaKnown RBP14.59□□□□□ -0.07
CD9-210ENST00000543916 PARVBQ9HBI1 364 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 SIDT1Q9NXL6 827 aaKnown RBP14.59□□□□□ -0.07
CD9-210ENST00000543916 PISDQ9UG56 409 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 ZNF180Q9UJW8 692 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 PCDHGA8Q9Y5G5 932 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 SNRNP200O75643 2136 aaKnown RBP14.59□□□□□ -0.07
CD9-210ENST00000543916 CEP295Q9C0D2 2601 aa14.59□□□□□ -0.07
CD9-210ENST00000543916 WDFY3Q8IZQ1 3526 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 A0A1W2PPV9 198 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 EFCAB7A8K855 629 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 ISM1B1AKI9 464 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 C1QTNF9BB2RNN3 333 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 PRICKLE3O43900 615 aaPredicted RBP14.58□□□□□ -0.08
CD9-210ENST00000543916 BRINP1O60477 761 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 ALDOAP04075 364 aaKnown RBP14.58□□□□□ -0.08
CD9-210ENST00000543916 SHBGP04278 402 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 C1QTNF9P0C862 333 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 JMJD7P0C870 316 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 FGF3P11487 239 aaPredicted RBP14.58□□□□□ -0.08
CD9-210ENST00000543916 PVRP15151 417 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 ST6GAL1P15907 406 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 CDH3P22223 829 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 PSMB5P28074 263 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 IMPA1P29218 277 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 SERPINB9P50453 376 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 PNLIPRP1P54315 467 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 CYP4F3Q08477 520 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 DLG1Q12959 904 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 PPP1R3AQ16821 1122 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 RAPH1Q70E73 1250 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 FAM129CQ86XR2 697 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 FAM20CQ8IXL6 584 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 RAB42Q8N4Z0 105 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 PPFIBP2Q8ND30 876 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 MDM1Q8TC05 714 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 MCOLN3Q8TDD5 553 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 ZNF480Q8WV37 535 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 SLC41A2Q96JW4 573 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 UBXN10Q96LJ8 280 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 DERL2Q9GZP9 239 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 KLHL25Q9H0H3 589 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 ASCL3Q9NQ33 180 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 SNX15Q9NRS6 342 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 C1GALT1Q9NS00 363 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 AKAP7Q9P0M2 348 aaPredicted RBP14.58□□□□□ -0.08
CD9-210ENST00000543916 LNPEPQ9UIQ6 1025 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 RAB21Q9UL25 225 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 AK5Q9Y6K8 562 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 IKBKGQ9Y6K9 419 aa14.58□□□□□ -0.08
CD9-210ENST00000543916 SLC9B1P1A6NJY1 282 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 TNFSF15O95150 251 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 CAPNS1P04632 268 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 NELFEP18615 380 aaKnown RBP14.57□□□□□ -0.08
CD9-210ENST00000543916 CRABP2P29373 138 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 HSD17B3P37058 310 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 SERPINB8P50452 374 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 MAPK10P53779 464 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 SH3BP2P78314 561 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 IRF9Q00978 393 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 CSHL1Q14406 222 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 KCNAB1Q14722 419 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 ARHGAP19Q14CB8 494 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 TSNQ15631 228 aaKnown RBP14.57□□□□□ -0.08
CD9-210ENST00000543916 SLC5A12Q1EHB4 618 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 EMBQ6PCB8 327 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 IGF2-ASQ6U949 168 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 SUSD1Q6UWL2 747 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 UNQ6494/PRO21346Q6UXR6 183 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 TAOK1Q7L7X3 1001 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 LRRC56Q8IYG6 542 aaPredicted RBP14.57□□□□□ -0.08
CD9-210ENST00000543916 CARFQ8N187 725 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 ANKRD7Q92527 254 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 CAVIN3Q969G5 261 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 PMEPA1Q969W9 287 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 SLC46A1Q96NT5 459 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 TRAPPC9Q96Q05 1148 aa14.57□□□□□ -0.08
CD9-210ENST00000543916 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms