RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	F11	P03951	625 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	BCKDHA	P12694	445 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	S100A3	P33764	101 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	TGFBR1	P36897	503 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	RGS4	P49798	205 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	CDH4	P55283	916 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	CXCR4	P61073	352 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	GBX1	Q14549	363 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	CATSPERE	Q5SY80	951 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	PSMA8	Q8TAA3	256 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	RPL3L	Q92901	407 aa	Known RBP	12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	LGALS12	Q96DT0	336 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	APOL4	Q9BPW4	351 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	CORO1B	Q9BR76	489 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	INPP5K	Q9BT40	448 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	CLPB	Q9H078	707 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	KCNH6	Q9H252	994 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	ABCG2	Q9UNQ0	655 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	NOD1	Q9Y239	953 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	TMED5	Q9Y3A6	229 aa		12.63	□□□□□ -0.39
DDX11-223	ENST00000542838	LOC730098	B7Z3J9	87 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	MANBA	O00462	879 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	MYO1D	O94832	1006 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	RHOC	P08134	193 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	HOXB6	P17509	224 aa	Known RBP	12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	RPS14	P62263	151 aa	Known RBP	12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	PHKG1	Q16816	387 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	OR2T5	Q6IEZ7	315 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	TRIM46	Q7Z4K8	759 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	TTC29	Q8NA56	475 aa	Predicted RBP	12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	OR2T29	Q8NH02	315 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	DSN1	Q9H410	356 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	ACOT13	Q9NPJ3	140 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	SCHIP1	Q9P0W5	487 aa	Predicted RBP	12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	ANKMY1	Q9P2S6	941 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	HSPE1-MOB4	S4R3N1	261 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	SCN10A	Q9Y5Y9	1956 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838		A0A096LPI6	279 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838		H0Y626	953 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	WDR47	O94967	919 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	DIRAS1	O95057	198 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	TRIM16	O95361	564 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	B3GALT4	O96024	378 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	AKR1A1	P14550	325 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	CD40LG	P29965	261 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	MAGEA2	P43356	314 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	TWF1	Q12792	350 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	C5orf22	Q49AR2	442 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	LRIF1	Q5T3J3	769 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	KDM4D	Q6B0I6	523 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	DNAJB8	Q8NHS0	232 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	LKAAEAR1	Q8TD35	194 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	POP5	Q969H6	163 aa	Known RBP	12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	MYOC	Q99972	504 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	GPR63	Q9BZJ6	419 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	SLIRP	Q9GZT3	109 aa	Known RBP	12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	GABARAPL1	Q9H0R8	117 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	RMND5A	Q9H871	391 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	PARVB	Q9HBI1	364 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	SERHL	Q9NQF3	203 aa		12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	KIAA1522	Q9P206	1035 aa	Predicted RBP	12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	SAMD4A	Q9UPU9	718 aa	Known RBP	12.62	□□□□□ -0.39
DDX11-223	ENST00000542838	CD36	P16671	472 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	ZNF7	P17097	686 aa	Predicted RBP	12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	PPP5C	P53041	499 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	FCGRT	P55899	365 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	TPTE	P56180	551 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	ABHD18	Q0P651	414 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	KCNJ8	Q15842	424 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	C1QTNF12	Q5T7M4	302 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	GLB1L	Q6UWU2	654 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	NEK10	Q6ZWH5	1172 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	SNX20	Q7Z614	316 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	ZNF598	Q86UK7	904 aa	Known RBP	12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	RHOXF1	Q8NHV9	184 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	ZHX1-C8orf76	Q96EF9	292 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	CEP295NL	Q96MC4	621 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	BOC	Q9BWV1	1114 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	RASSF1	Q9NS23	344 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	ASIC5	Q9NY37	505 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	IL17C	Q9P0M4	197 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	TRPS1	Q9UHF7	1281 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	ERVW-1	Q9UQF0	538 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838		H3BNC9	293 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	hCG_2039718	K7EN88	272 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	WNT9A	O14904	365 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	SLC25A14	O95258	325 aa	Predicted RBP	12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	CCNDBP1	O95273	360 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	EBLN1	P0CF75	366 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	PABPC1	P11940	636 aa	Known RBP	12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	SERPINB1	P30740	379 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	CDKN2C	P42773	168 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	DOK6	Q6PKX4	331 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	FAM151B	Q6UXP7	276 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	LINGO4	Q6UY18	593 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	PRSS48	Q7RTY5	328 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	SERPINA9	Q86WD7	417 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	ARMC8	Q8IUR7	673 aa		12.61	□□□□□ -0.39
DDX11-223	ENST00000542838	MCFD2	Q8NI22	146 aa		12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms