RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SLC28A2O43868 658 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 FABP3P05413 133 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 FAM163BP0C2L3 166 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 PAX3P23760 479 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 ARSFP54793 590 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 BLOC1S3Q6QNY0 202 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 MTSS1LQ765P7 747 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 CAMKK1Q8N5S9 505 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 CXorf40AQ8TE69 158 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 OSBPL6Q9BZF3 934 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 SAMD4AQ9UPU9 718 aaKnown RBP15.73■□□□□ 0.11
VARS2-212ENST00000542001 KLHL20Q9Y2M5 609 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 M0QZQ0 153 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 MANBAO00462 879 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 CREG1O75629 220 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 OAZ2O95190 189 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 EPOP01588 193 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 PABPC4LP0CB38 370 aaKnown RBP15.73■□□□□ 0.11
VARS2-212ENST00000542001 CYBAP13498 195 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 TNFRSF1BP20333 461 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 ATP13A5Q4VNC0 1218 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 LY6G5CQ5SRR4 150 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 RSBN1Q5VWQ0 802 aaPredicted RBP15.73■□□□□ 0.11
VARS2-212ENST00000542001 TMEM207Q6UWW9 146 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 RFLNAQ6ZTI6 216 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 UBASH3BQ8TF42 649 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 ZNF599Q96NL3 588 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 CRISPLD1Q9H336 500 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 C11orf16Q9NQ32 467 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 ATP6V1G1O75348 118 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 SOX6P35712 828 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 ETV3P41162 512 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 SGSHP51688 502 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 SMARCB1Q12824 385 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 TUBB3Q13509 450 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 INTS11Q5TA45 600 aaKnown RBP15.72■□□□□ 0.11
VARS2-212ENST00000542001 FRG2Q64ET8 278 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 EGLN2Q96KS0 407 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 FRG2BQ96QU4 278 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 DUSP26Q9BV47 211 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 CSNK1G1Q9HCP0 422 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 DNAJB9Q9UBS3 223 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 TEKT2Q9UIF3 430 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 DHRS7Q9Y394 339 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 ATG13O75143 517 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 PSMD8P48556 350 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 EEFSECP57772 596 aaKnown RBP15.72■□□□□ 0.11
VARS2-212ENST00000542001 CCDC92Q53HC0 331 aaPredicted RBP15.72■□□□□ 0.11
VARS2-212ENST00000542001 CAPN13Q6MZZ7 669 aaPredicted RBP15.72■□□□□ 0.11
VARS2-212ENST00000542001 PTCHD4Q6ZW05 846 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 CLEC14AQ86T13 490 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 PKP4Q99569 1192 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 CCM2LQ9NUG4 571 aaPredicted RBP15.72■□□□□ 0.11
VARS2-212ENST00000542001 ATP6V1HQ9UI12 483 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 KIAA1217Q5T5P2 1943 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 MITFO75030 526 aaPredicted RBP15.72■□□□□ 0.11
VARS2-212ENST00000542001 TSC22D2O75157 780 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 PCCBP05166 539 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 UMPSP11172 480 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 SSR2P43308 183 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 LMAN2Q12907 356 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 SEMA3BQ13214 749 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 AAK1Q2M2I8 961 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 VTCN1Q7Z7D3 282 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 ADGRG6Q86SQ4 1221 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 MARVELD2Q8N4S9 558 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 FLCNQ8NFG4 579 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 MYEOVQ96EZ4 313 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 ABCB9Q9NP78 766 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 ATAD3AQ9NVI7 634 aa15.72■□□□□ 0.11
VARS2-212ENST00000542001 EFCAB10A6NFE3 127 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 PLK4O00444 970 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 KPNA4O00629 521 aaPredicted RBP15.71■□□□□ 0.11
VARS2-212ENST00000542001 PABPC1P11940 636 aaKnown RBP15.71■□□□□ 0.11
VARS2-212ENST00000542001 CD70P32970 193 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 CENPAP49450 140 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 EPS8Q12929 822 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 INAQ16352 499 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 PLEKHG6Q3KR16 790 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 CYP4Z1Q86W10 505 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 TBC1D19Q8N5T2 526 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 OR10G6Q8NH81 332 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 HPS1Q92902 700 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 FERD3LQ96RJ6 166 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 HEPHQ9BQS7 1158 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 SLC32A1Q9H598 525 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 RPF2Q9H7B2 306 aaKnown RBP15.71■□□□□ 0.11
VARS2-212ENST00000542001 AIG1Q9NVV5 245 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 PCTPQ9UKL6 214 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 RGS10O43665 173 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 ASLP04424 464 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 BCKDHAP12694 445 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 CDH1P12830 882 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 NADSYN1Q6IA69 706 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 ATG14Q6ZNE5 492 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 LARP4Q71RC2 724 aaKnown RBP eCLIP15.71■□□□□ 0.119e-7■■□□□ 13.7
VARS2-212ENST00000542001 NXPE1Q8N323 547 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 C1QTNF1Q9BXJ1 281 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 INSL5Q9Y5Q6 135 aa15.71■□□□□ 0.11
VARS2-212ENST00000542001 ST14Q9Y5Y6 855 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms