RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 FAM20CQ8IXL6 584 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 CACNA2D3Q8IZS8 1091 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 MMGT1Q8N4V1 131 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 RAB42Q8N4Z0 105 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 IL22RA1Q8N6P7 574 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 ASB11Q8WXH4 323 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 TRAPPC9Q96Q05 1148 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 CCNL2Q96S94 520 aaPredicted RBP8.92□□□□□ -0.98
SNHG1-215ENST00000540904 RAB11FIP5Q9BXF6 653 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 PITPNM3Q9BZ71 974 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 CPNE5Q9HCH3 593 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 FAM114A2Q9NRY5 505 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 LNPEPQ9UIQ6 1025 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 PILRAQ9UKJ1 303 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 RARRES3Q9UL19 164 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 LHX6Q9UPM6 363 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 BTRCQ9Y297 605 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 PSAT1Q9Y617 370 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 USP24Q9UPU5 2620 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 ACACAQ13085 2346 aa8.92□□□□□ -0.98
SNHG1-215ENST00000540904 CELSR3Q9NYQ7 3312 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 A0A0J9YY10 115 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 TEX51A0A1B0GUA7 166 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 TCRBV9S1A1TA0A576 114 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 RAD1O60671 282 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 SPAG6O75602 509 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 KIAA0754O94854 1291 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 TIAF1O95411 115 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 SYF2O95926 243 aaKnown RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 CATP04040 527 aaKnown RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 MPC1LP0DKB6 136 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 FGF5P12034 268 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 SAT1P21673 171 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 MAP4P27816 1152 aaKnown RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 MAGEA4P43358 317 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 RGS4P49798 205 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 ATP1A2P50993 1020 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 PGGT1BP53609 377 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 UCNP55089 124 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 TMPRSS3P57727 454 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 TUBB4BP68371 445 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 TSTA3Q13630 321 aaPredicted RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 SF1Q15637 639 aaKnown RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 SLC5A12Q1EHB4 618 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.91□□□□□ -0.981e-323■■□□□ 13.7
SNHG1-215ENST00000540904 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 MANEAQ5SRI9 462 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 ARHGAP40Q5TG30 622 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 HECTD2Q5U5R9 776 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 PWWP2BQ6NUJ5 590 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 PAQR3Q6TCH7 311 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 CYHR1Q6ZMK1 362 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 CCDC81Q6ZN84 652 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 TIPARPQ7Z3E1 657 aaKnown RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 SLC26A11Q86WA9 606 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 ZC3HC1Q86WB0 502 aaKnown RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 NLGN4XQ8N0W4 816 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 CEP112Q8N8E3 955 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 C19orf47Q8N9M1 422 aaKnown RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 NLGN4YQ8NFZ3 816 aaPredicted RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 OR9A1PQ8NGU1 263 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 OR2L8Q8NGY9 312 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 FLVCR1-AS1Q8TAF5 88 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 DENND1AQ8TEH3 1009 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 EEF1AKMT1Q8WVE0 214 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 SEC14L1Q92503 715 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 CDKL2Q92772 493 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 N4BP2L2Q92802 583 aaPredicted RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 NKD1Q969G9 470 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 SLC22A18Q96BI1 424 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 OLFM1Q99784 485 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 SPRY4Q9C004 299 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 PHACTR1Q9C0D0 580 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 FANCEQ9HB96 536 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 TXNDC16Q9P2K2 825 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 DMGDHQ9UI17 866 aaKnown RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 CORO1CQ9ULV4 474 aaPredicted RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 KLHL20Q9Y2M5 609 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 VWA7Q9Y334 891 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 TMEM184BQ9Y519 407 aaPredicted RBP8.91□□□□□ -0.98
SNHG1-215ENST00000540904 PIKFYVEQ9Y2I7 2098 aa8.91□□□□□ -0.98
SNHG1-215ENST00000540904 CXorf49A8MYA2 514 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-215ENST00000540904 TMEM150CB9EJG8 249 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 GFYI3L273 518 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 MYO1CO00159 1063 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 EIF3FO00303 357 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-215ENST00000540904 EFSO43281 561 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 ZBTB14O43829 449 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 NTRK1P04629 796 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 MAGP20916 626 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 FDXRP22570 491 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 PSMB5P28074 263 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 GPX6P59796 221 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 IL2P60568 153 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 VAC14Q08AM6 782 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 FASTKQ14296 549 aaKnown RBP8.9□□□□□ -0.98
SNHG1-215ENST00000540904 ZIC1Q15915 447 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 CYP2A13Q16696 494 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 GLE1Q53GS7 698 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms