RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 EIF4G3O43432 1585 aaKnown RBP8.59□□□□□ -1.03
YBX3-208ENST00000540447 PIP5K1BO14986 540 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 NME6O75414 186 aaPredicted RBP8.59□□□□□ -1.03
YBX3-208ENST00000540447 MTA2O94776 668 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 TSPAN15O95858 294 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 HIST1H2ABP04908 130 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ALDOBP05062 364 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 HLA-EP13747 358 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 SLC2A5P22732 501 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 NUDT1P36639 197 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 GSK3BP49841 420 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ZNF169Q14929 603 aaPredicted RBP8.59□□□□□ -1.03
YBX3-208ENST00000540447 CYP1B1Q16678 543 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 OR2T5Q6IEZ7 315 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 HIST3H2AQ7L7L0 130 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ZNF627Q7L945 461 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ZDHHC17Q8IUH5 632 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ANKFN1Q8N957 763 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 BOLLQ8N9W6 283 aaKnown RBP8.59□□□□□ -1.03
YBX3-208ENST00000540447 OR2T29Q8NH02 315 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 HIST1H2ACQ93077 130 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 TSSK3Q96PN8 268 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 SECISBP2Q96T21 854 aaKnown RBP8.59□□□□□ -1.03
YBX3-208ENST00000540447 ZNF341Q9BYN7 854 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ZNF70Q9UC06 446 aaPredicted RBP8.59□□□□□ -1.03
YBX3-208ENST00000540447 ZNHIT2Q9UHR6 403 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ENPP5Q9UJA9 477 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ENTPD4Q9Y227 616 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 VWA7Q9Y334 891 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 PCDHB3Q9Y5E6 796 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 BORCS7-ASMTA0A0B4J1R7 106 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 TCAF2A6NFQ2 919 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 EFCAB7A8K855 629 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 SOCS2O14508 198 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 OR7A17O14581 309 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 SEPT4O43236 478 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 HCN1O60741 890 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 PRAMEF2O60811 474 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 PET100P0DJ07 73 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 TPSB2P20231 275 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 MAOBP27338 520 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 SSTR2P30874 369 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 PON3Q15166 354 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 TPSAB1Q15661 275 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 HLFQ16534 295 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ZNF697Q5TEC3 545 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 NAPRTQ6XQN6 538 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 HID1Q8IV36 788 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 PMM1Q92871 262 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 AP5M1Q9H0R1 490 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ZNF395Q9H8N7 513 aaPredicted RBP8.59□□□□□ -1.03
YBX3-208ENST00000540447 SLC38A7Q9NVC3 462 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 TMEM181Q9P2C4 612 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 MINPP1Q9UNW1 487 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 OR10H1Q9Y4A9 318 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 PXDNLA1KZ92 1463 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 MITFO75030 526 aaPredicted RBP8.59□□□□□ -1.03
YBX3-208ENST00000540447 NDST3O95803 873 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 PRKACGP22612 351 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 NOS2P35228 1153 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 CD86P42081 329 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 FOXM1Q08050 763 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 TTLL4Q14679 1199 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ATP6AP1Q15904 470 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 EPGNQ6UW88 154 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 CREB3L2Q70SY1 520 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 DCAKDQ8WVC6 231 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 FAM84AQ96KN4 292 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 TWNKQ96RR1 684 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 MROQ9BYG7 248 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ANKRD60Q9BZ19 345 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 LRTM1Q9HBL6 345 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 SDHAF2Q9NX18 166 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 SAGE1Q9NXZ1 904 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 B3GNT2Q9NY97 397 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 GULP1Q9UBP9 304 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ARL5AQ9Y689 179 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 PCDH17O14917 1159 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 CALCAP01258 141 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 TFP02787 698 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 ERVK-21P61565 698 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 KCNAB2Q13303 367 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 LRRC70Q7Z2Q7 622 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 TMEM151AQ8N4L1 468 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 CHDHQ8NE62 594 aaPredicted RBP8.59□□□□□ -1.03
YBX3-208ENST00000540447 GPR156Q8NFN8 814 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 DPF3Q92784 378 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 SCGB3A2Q96PL1 93 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 MXRA8Q9BRK3 442 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 B3GNT4Q9C0J1 378 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 KCNK13Q9HB14 408 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 POT1Q9NUX5 634 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 PCDHGA7Q9Y5G6 932 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 SNCAIPQ9Y6H5 919 aa8.59□□□□□ -1.03
YBX3-208ENST00000540447 TOPBP1Q92547 1522 aa8.58□□□□□ -1.04
YBX3-208ENST00000540447 ZNF608Q9ULD9 1512 aaPredicted RBP8.58□□□□□ -1.04
YBX3-208ENST00000540447 RPS10-NUDT3A0A1W2PQS6 291 aa8.58□□□□□ -1.04
YBX3-208ENST00000540447 A0A1W2PRQ8 180 aa8.58□□□□□ -1.04
YBX3-208ENST00000540447 RBMXL2O75526 392 aaKnown RBP8.58□□□□□ -1.04
YBX3-208ENST00000540447 GTF2F2P13984 249 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms