RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 MFHAS1Q9Y4C4 1052 aa7.51□□□□□ -1.21
CCDC60-204ENST00000539847 SNX5Q9Y5X3 404 aa7.51□□□□□ -1.21
CCDC60-204ENST00000539847 GPR45Q9Y5Y3 372 aa7.51□□□□□ -1.21
CCDC60-204ENST00000539847 OAS3Q9Y6K5 1087 aaKnown RBP7.51□□□□□ -1.21
CCDC60-204ENST00000539847 PATJQ8NI35 1801 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 FAM234BA2RU67 622 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ZNF99A8MXY4 864 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 TMEM233B4DJY2 109 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 H7C4K7 107 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 J3QRK9 145 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 KCNK1O00180 336 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 UPK1AO00322 258 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 AZIN1O14977 448 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 INPP4BO15327 924 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ADAM12O43184 909 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 NUAK1O60285 661 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 NDUFS2O75306 463 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 SOAT2O75908 522 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 OXSR1O95747 527 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 NDST3O95803 873 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 LRG1P02750 347 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 GSNP06396 782 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ALDOCP09972 364 aaKnown RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 HNRNPLP14866 589 aaKnown RBP eCLIP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 CPB1P15086 417 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 WARSP23381 471 aaKnown RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 FCARP24071 287 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ARNTP27540 789 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 RPL9P32969 192 aaKnown RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 UGT2B10P36537 528 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 GMPRP36959 345 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 HPCAL1P37235 193 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 OPRL1P41146 370 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 GLRBP48167 497 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 PCYT1AP49585 367 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 SUOXP51687 545 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ATXN3P54252 364 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 TPI1P60174 286 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 OSTNP61366 133 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 SHC2P98077 582 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 LIPEQ05469 1076 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ATP1A4Q13733 1029 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 RCAN2Q14206 197 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 LRRC32Q14392 662 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 RPS6KA2Q15349 733 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 MAPRE1Q15691 268 aaKnown RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 NEDD8Q15843 81 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 CTF1Q16619 201 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 HIST2H2ACQ16777 129 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 UPP1Q16831 310 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ST3GAL2Q16842 350 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ZNF181Q2M3W8 571 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 SMU1Q2TAY7 513 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 FAM98BQ52LJ0 330 aaKnown RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 XKR4Q5GH76 650 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 PRSS36Q5K4E3 855 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 OTUD1Q5VV17 481 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 KANK2Q63ZY3 851 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ZNF470Q6ECI4 717 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 TANGO2Q6ICL3 276 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 SLC2A7Q6PXP3 512 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ALKAL1Q6UXT8 129 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 RANBP10Q6VN20 620 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 FAM131BQ86XD5 332 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ARMC8Q8IUR7 673 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 HID1Q8IV36 788 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 MMAAQ8IVH4 418 aaKnown RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 MFSD6LQ8IWD5 586 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ELMOD1Q8N336 334 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 VWA5B2Q8N398 1253 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 MFSD4AQ8N468 514 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 GALNT6Q8NCL4 622 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ZNF555Q8NEP9 628 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 DNAJB8Q8NHS0 232 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 MAGEE2Q8TD90 523 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 FBXL8Q96CD0 374 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 ATXN7L3BQ96GX2 97 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 FBXL20Q96IG2 436 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 LOXL4Q96JB6 756 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 MARK4Q96L34 752 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 PPP1R36Q96LQ0 422 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 NSMCE3Q96MG7 304 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 MUS81Q96NY9 551 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 RBM4BQ9BQ04 359 aaKnown RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 KCTD14Q9BQ13 255 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 TRIM62Q9BVG3 475 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 RBM4Q9BWF3 364 aaKnown RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 FUNDC2Q9BWH2 189 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 MAGEB5Q9BZ81 275 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 NAA50Q9GZZ1 169 aaKnown RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 TFB2MQ9H5Q4 396 aaKnown RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 C8orf33Q9H7E9 229 aaPredicted RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 BRD9Q9H8M2 597 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 NTN4Q9HB63 628 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 GLOD4Q9HC38 313 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 HEBP1Q9NRV9 189 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 FAM118AQ9NWS6 357 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 DNAJB9Q9UBS3 223 aa7.5□□□□□ -1.21
CCDC60-204ENST00000539847 UBQLN1Q9UMX0 589 aaKnown RBP7.5□□□□□ -1.21
CCDC60-204ENST00000539847 CYP8B1Q9UNU6 501 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms