RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 PRAMEF14Q5SWL7 426 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 METRNLQ641Q3 311 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 PMS2CLQ68D20 193 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 SLC30A9Q6PML9 568 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 ZYG11AQ6WRX3 759 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 PRR23BQ6ZRT6 265 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 NEK10Q6ZWH5 1172 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 UBE2R2Q712K3 238 aaPredicted RBP5.06□□□□□ -1.6
LINC02408-202ENST00000538573 IQCHQ86VS3 1027 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 SPATS2Q86XZ4 545 aaKnown RBP5.06□□□□□ -1.6
LINC02408-202ENST00000538573 C10orf107Q8IVU9 208 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 PHACTR4Q8IZ21 702 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 SLC22A15Q8IZD6 547 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 SLC22A18ASQ8N1D0 253 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 OXR1Q8N573 874 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 CCNYL1Q8N7R7 359 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 PHC3Q8NDX5 983 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 CCL4L1Q8NHW4 92 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 PPP1R14CQ8TAE6 165 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 RHEBL1Q8TAI7 183 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 RDH11Q8TC12 318 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 MCOLN3Q8TDD5 553 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 PIGKQ92643 395 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 PDXPQ96GD0 296 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 HIST1H2AHQ96KK5 128 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 HIST1H2AJQ99878 128 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 EGFL8Q99944 293 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 TIMM29Q9BSF4 260 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 H2AFJQ9BTM1 129 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 MECRQ9BV79 373 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 CAPS2Q9BXY5 557 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 TRIM54Q9BYV2 358 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 WWP1Q9H0M0 922 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 TMEM168Q9H0V1 697 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 DPEP2Q9H4A9 486 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 MANSC1Q9H8J5 431 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 DNAJC28Q9NX36 388 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 COPG2Q9UBF2 871 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 GULP1Q9UBP9 304 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 ADAM21Q9UKJ8 722 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 ADAMTS6Q9UKP5 1117 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 ACSL5Q9ULC5 683 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 PNMA8BQ9ULN7 279 aaPredicted RBP5.06□□□□□ -1.6
LINC02408-202ENST00000538573 TRIM33Q9UPN9 1127 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 FANCMQ8IYD8 2048 aa5.06□□□□□ -1.6
LINC02408-202ENST00000538573 ZFC3H1O60293 1989 aaKnown RBP5.05□□□□□ -1.6
LINC02408-202ENST00000538573 TP53BP1Q12888 1972 aaPredicted RBP5.05□□□□□ -1.6
LINC02408-202ENST00000538573 LRP4O75096 1905 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 KMT2EQ8IZD2 1858 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 TNRC6BQ9UPQ9 1833 aaKnown RBP5.05□□□□□ -1.6
LINC02408-202ENST00000538573 hCG_2014768A0A024R1R8 64 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 TRBV23OR9-2A0A075B6M9 112 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 A0A1B0GTW7 788 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 A0A1B0GVT2 93 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 CCDC189A1A4V9 331 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 TCP11X1B4DZS4 312 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 TARM1B6A8C7 271 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 GFYI3L273 518 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 VILLO15195 856 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 SLC16A5O15375 505 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 TRIM13O60858 407 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 PSIP1O75475 530 aaKnown RBP5.05□□□□□ -1.6
LINC02408-202ENST00000538573 MATN4O95460 622 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 CATP04040 527 aaKnown RBP5.05□□□□□ -1.6
LINC02408-202ENST00000538573 CFIP05156 583 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 CYP2A7P20853 494 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 ATP5F1P24539 256 aaPredicted RBP5.05□□□□□ -1.6
LINC02408-202ENST00000538573 ACADLP28330 430 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 ACTR1BP42025 376 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 HALP42357 657 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 MAPK9P45984 424 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 BDKRB1P46663 353 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 NXPH1P58417 271 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 ACTR1AP61163 376 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 DMPKQ09013 629 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 ASPHQ12797 758 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 ILF3Q12906 894 aaKnown RBP eCLIP5.05□□□□□ -1.6
LINC02408-202ENST00000538573 STX3Q13277 289 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 KRT33BQ14525 404 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 TGFBIQ15582 683 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 CHI3L2Q15782 390 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 LPAL2Q16609 132 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 PHKG1Q16816 387 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 PFKFB4Q16877 469 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 TUBB8Q3ZCM7 444 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 FBXO48Q5FWF7 155 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 CFAP157Q5JU67 520 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 ATG16L1Q676U5 607 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 TTC23LQ6PF05 361 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 SBSNQ6UWP8 590 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 XKR5Q6UX68 686 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 ZCCHC23Q6ZST2 131 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 TAF8Q7Z7C8 310 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 ADAMTSL2Q86TH1 951 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 PDZD3Q86UT5 571 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 PARGQ86W56 976 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 SYT12Q8IV01 421 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 SLC22A9Q8IVM8 553 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 TRIM42Q8IWZ5 723 aa5.05□□□□□ -1.6
LINC02408-202ENST00000538573 FBXO39Q8N4B4 442 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms