RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 PRUNE1Q86TP1 453 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 TRIM73Q86UV7 250 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 VRK3Q8IV63 474 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 LINC01555Q8NAE3 123 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 OR2Y1Q8NGV0 311 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 HMGCLL1Q8TB92 370 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 MAGEC3Q8TD91 643 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 ZUFSPQ96AP4 578 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 RAD51AP1Q96B01 352 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 FER1L6-AS2Q96M78 137 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 NDC1Q9BTX1 674 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 SPRTNQ9H040 489 aaPredicted RBP12.69□□□□□ -0.38
MRPS35-202ENST00000536569 TXLNGQ9NUQ3 528 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 EURLQ9NYK6 297 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 C5AR2Q9P296 337 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 NDOR1Q9UHB4 597 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 SLC39A10Q9ULF5 831 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 KLK4Q9Y5K2 254 aa12.69□□□□□ -0.38
MRPS35-202ENST00000536569 SPTBP11277 2137 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.68□□□□□ -0.38
MRPS35-202ENST00000536569 IQCF5A8MTL0 148 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 NRDCO43847 1150 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 ONECUT2O95948 504 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 CBSLP0DN79 551 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 PIM1P11309 404 aaPredicted RBP12.68□□□□□ -0.38
MRPS35-202ENST00000536569 ATP5DP30049 168 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 CBSP35520 551 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 FOLR3P41439 243 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 MAGEA6P43360 314 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 GCGRP47871 477 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 CSE1LP55060 971 aaKnown RBP12.68□□□□□ -0.38
MRPS35-202ENST00000536569 GRB7Q14451 532 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 NAA25Q14CX7 972 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 NKAIN1Q4KMZ8 207 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 TCTE1Q5JU00 501 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 MRPL14Q6P1L8 145 aaKnown RBP12.68□□□□□ -0.38
MRPS35-202ENST00000536569 ZNF655Q8N720 491 aaPredicted RBP12.68□□□□□ -0.38
MRPS35-202ENST00000536569 LKAAEAR1Q8TD35 194 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 FKBP10Q96AY3 582 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 PTERQ96BW5 349 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 FOPNLQ96NB1 174 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 SMAD5Q99717 465 aaKnown RBP12.68□□□□□ -0.38
MRPS35-202ENST00000536569 LZTFL1Q9NQ48 299 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 IL1RAPL1Q9NZN1 696 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 MARCH4Q9P2E8 410 aaPredicted RBP12.68□□□□□ -0.38
MRPS35-202ENST00000536569 IFT80Q9P2H3 777 aaPredicted RBP12.68□□□□□ -0.38
MRPS35-202ENST00000536569 PLAGL1Q9UM63 463 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 SOX13Q9UN79 622 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 PLAAQ9Y263 795 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 VPS9D1Q9Y2B5 631 aa12.68□□□□□ -0.38
MRPS35-202ENST00000536569 TTLL8A6PVC2 850 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 PEX12O00623 359 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 HCRTR1O43613 425 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 CEP104O60308 925 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 ALBP02768 609 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 ESR1P03372 595 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 PAMP19021 973 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 MAGP20916 626 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 NMBRP28336 390 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 SOX8P57073 446 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 CHAF1BQ13112 559 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 ATP1A4Q13733 1029 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 TYSND1Q2T9J0 566 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 DEFB110Q30KQ9 67 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 MLIPQ5VWP3 458 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 MRGPREQ86SM8 312 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 LDB1Q86U70 411 aaPredicted RBP12.67□□□□□ -0.38
MRPS35-202ENST00000536569 MCATQ8IVS2 390 aaKnown RBP12.67□□□□□ -0.38
MRPS35-202ENST00000536569 LRRC8AQ8IWT6 810 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 KRT222Q8N1A0 295 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 FAM26EQ8N5C1 309 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 EFCAB3Q8N7B9 438 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 LMNTD1Q8N9Z9 388 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 CLEC1AQ8NC01 280 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 GALNT11Q8NCW6 608 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 FDCSPQ8NFU4 85 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 CFAP61Q8NHU2 1237 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 ZNF285Q96NJ3 590 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 WDR54Q9H977 334 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 IRAK4Q9NWZ3 460 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 GPR83Q9NYM4 423 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 SPATA7Q9P0W8 599 aa12.67□□□□□ -0.38
MRPS35-202ENST00000536569 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.67□□□□□ -0.38
MRPS35-202ENST00000536569 FLNCQ14315 2725 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 A0A1B0GX78 115 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 MAGEB16A2A368 324 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 ZNF185O15231 689 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 PRICKLE3O43900 615 aaPredicted RBP12.66□□□□□ -0.38
MRPS35-202ENST00000536569 SRPX2O60687 465 aaPredicted RBP12.66□□□□□ -0.38
MRPS35-202ENST00000536569 VPS4BO75351 444 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 SORBS2O94875 1100 aaKnown RBP12.66□□□□□ -0.38
MRPS35-202ENST00000536569 VAPBO95292 243 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 C1orf105O95561 183 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 MLNP12872 115 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 OGNP20774 298 aaKnown RBP12.66□□□□□ -0.38
MRPS35-202ENST00000536569 MGAT1P26572 445 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 ARNTP27540 789 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 KCNJ1P48048 391 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 MLLT10P55197 1068 aa12.66□□□□□ -0.38
MRPS35-202ENST00000536569 CRADDP78560 199 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms