RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 XKR9Q5GH70 373 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 KRT39Q6A163 491 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 SNRNP48Q6IEG0 339 aaKnown RBP3.99□□□□□ -1.77
MDM2-223ENST00000536089 ZSCAN25Q6NSZ9 544 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 TPRG1Q6ZUI0 275 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 CCDC186Q7Z3E2 898 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 GALNTL5Q7Z4T8 443 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 FOXRED2Q8IWF2 684 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 MAGEC3Q8TD91 643 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 ACER1Q8TDN7 264 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 TAAR8Q969N4 342 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 C3orf30Q96M34 536 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 CSF3RQ99062 836 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 EBF3Q9H4W6 596 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 ZWILCHQ9H900 591 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 GRPEL1Q9HAV7 217 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 HAO2Q9NYQ3 351 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 GDE1Q9NZC3 331 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 CCL27Q9Y4X3 112 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 MICAL3Q7RTP6 2002 aa3.99□□□□□ -1.77
MDM2-223ENST00000536089 TRIP12Q14669 1992 aaPredicted RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 MYH6P13533 1939 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 TMEM8BA6NDV4 472 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 GOLGA6L9A6NEM1 432 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 TMEM189-UBE2V1I3L0A0 370 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 NDUFS4O43181 175 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 MOSPD3O75425 235 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 SURF6O75683 361 aaKnown RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 QDPRP09417 244 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 SRCP12931 536 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 FDPSP14324 419 aaKnown RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 PFKFB1P16118 471 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 ITGB8P26012 769 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 APOBEC1P41238 236 aaKnown RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 NR4A2P43354 598 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 FASLGP48023 281 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 RAB28P51157 221 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 ZNF81P51508 661 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 CDH13P55290 713 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 ABATP80404 500 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 RALGDSQ12967 914 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 UBE2V1Q13404 147 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 CBWD6Q4V339 395 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 CCDC184Q52MB2 194 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 CBWD3Q5JTY5 395 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 KRBOX4Q5JUW0 171 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 COLEC12Q5KU26 742 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 CST9LP1Q5W188 147 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 C18orf63Q68DL7 685 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 PAPD4Q6PIY7 484 aaKnown RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 CCNI2Q6ZMN8 369 aaPredicted RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 ARMCX2Q7L311 632 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 IRF2BP2Q7Z5L9 587 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 TLK2Q86UE8 772 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 TMEM173Q86WV6 379 aaPredicted RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 ADHFE1Q8IWW8 467 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 PM20D2Q8IYS1 436 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 RBM15BQ8NDT2 890 aaKnown RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 OR2AK2Q8NG84 335 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 WFIKKN2Q8TEU8 576 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 RHBDF1Q96CC6 855 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 HDAC11Q96DB2 347 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 DACH2Q96NX9 599 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 QRFPRQ96P65 431 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 RAB3IPQ96QF0 476 aaPredicted RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 RIOK1Q9BRS2 568 aaKnown RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 CHMP4BQ9H444 224 aaKnown RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 PIH1D3Q9NQM4 214 aaKnown RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 C5AR2Q9P296 337 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 SLC24A2Q9UI40 661 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 CTNNA3Q9UI47 895 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 AGO1Q9UL18 857 aaKnown RBP3.98□□□□□ -1.77
MDM2-223ENST00000536089 SCN5AQ14524 2016 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 NLRC5Q86WI3 1866 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 A0A0C4DFX4 3053 aa3.98□□□□□ -1.77
MDM2-223ENST00000536089 COL4A6Q14031 1691 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 EDDM13A0A1B0GTR0 161 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 FAM170AA1A519 330 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 PI4K2BG5E9Z4 385 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 HMMRO75330 724 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 ZNF217O75362 1048 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 FYNP06241 537 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 PGK2P07205 417 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 SCG2P13521 617 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 NR2F2P24468 414 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 HRH2P25021 359 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 MC5RP33032 325 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 GNL1P36915 607 aaPredicted RBP3.97□□□□□ -1.77
MDM2-223ENST00000536089 ZNF41P51814 821 aaPredicted RBP3.97□□□□□ -1.77
MDM2-223ENST00000536089 ZNF75DP51815 510 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 PGGT1BP53609 377 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 CLDN20P56880 219 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 DYNLL1P63167 89 aaKnown RBP3.97□□□□□ -1.77
MDM2-223ENST00000536089 COG7P83436 770 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 PPARDQ03181 441 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 SPOCK1Q08629 439 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 PLA2G7Q13093 441 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 ITGA7Q13683 1181 aa3.97□□□□□ -1.77
MDM2-223ENST00000536089 DHX34Q14147 1143 aaKnown RBP3.97□□□□□ -1.77
MDM2-223ENST00000536089 CALCRLQ16602 461 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms